Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL353997.1-201ENST00000432936 108 ntBASIC3.81□□□□□ -1.8
MRE11P49959 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.81□□□□□ -1.8
MRE11P49959 AL031274.1-201ENST00000450334 232 ntBASIC3.81□□□□□ -1.8
MRE11P49959 RPL27AP5-201ENST00000469428 449 ntBASIC3.81□□□□□ -1.8
MRE11P49959 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.81□□□□□ -1.8
MRE11P49959 RNA5SP341-201ENST00000516261 117 ntBASIC3.81□□□□□ -1.8
MRE11P49959 RNU6-1271P-201ENST00000517049 105 ntBASIC3.81□□□□□ -1.8
MRE11P49959 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.81□□□□□ -1.8
MRE11P49959 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.81□□□□□ -1.8
MRE11P49959 AL355297.3-201ENST00000604082 446 ntBASIC3.81□□□□□ -1.8
MRE11P49959 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.81□□□□□ -1.8
MRE11P49959 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MRE11P49959 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.81□□□□□ -1.8
MRE11P49959 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MRE11P49959 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
MRE11P49959 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
MRE11P49959 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MRE11P49959 Y_RNA.48-201ENST00000362710 103 ntBASIC3.8□□□□□ -1.8
MRE11P49959 Y_RNA.106-201ENST00000363189 100 ntBASIC3.8□□□□□ -1.8
MRE11P49959 RNU6-384P-201ENST00000364900 104 ntBASIC3.8□□□□□ -1.8
MRE11P49959 Y_RNA.424-201ENST00000384063 103 ntBASIC3.8□□□□□ -1.8
MRE11P49959 Y_RNA.577-201ENST00000384794 101 ntBASIC3.8□□□□□ -1.8
MRE11P49959 RNU6-1025P-201ENST00000410629 104 ntBASIC3.8□□□□□ -1.8
MRE11P49959 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.8□□□□□ -1.8
MRE11P49959 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MRE11P49959 CYCSP4-201ENST00000429682 331 ntBASIC3.8□□□□□ -1.8
MRE11P49959 CHEK2P4-201ENST00000450340 246 ntBASIC3.8□□□□□ -1.8
MRE11P49959 SSXP4-201ENST00000451349 245 ntBASIC3.8□□□□□ -1.8
MRE11P49959 FABP5P15-201ENST00000453566 214 ntBASIC3.8□□□□□ -1.8
MRE11P49959 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MRE11P49959 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.8□□□□□ -1.8
MRE11P49959 ACA59.1-201ENST00000515966 143 ntBASIC3.8□□□□□ -1.8
MRE11P49959 AC022616.4-201ENST00000522985 181 ntBASIC3.8□□□□□ -1.8
MRE11P49959 CBX3P8-201ENST00000532412 525 ntBASIC3.8□□□□□ -1.8
MRE11P49959 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.8□□□□□ -1.8
MRE11P49959 HSBP1P1-201ENST00000555205 166 ntBASIC3.8□□□□□ -1.8
MRE11P49959 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.8□□□□□ -1.8
MRE11P49959 MED28P6-201ENST00000558776 231 ntBASIC3.8□□□□□ -1.8
MRE11P49959 MYL12BP1-201ENST00000569826 507 ntBASIC3.8□□□□□ -1.8
MRE11P49959 CPDP1-201ENST00000579660 283 ntBASIC3.8□□□□□ -1.8
MRE11P49959 AL033523.1-201ENST00000605153 153 ntBASIC3.8□□□□□ -1.8
MRE11P49959 AL121917.1-203ENST00000605534 577 ntBASIC3.8□□□□□ -1.8
MRE11P49959 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.8□□□□□ -1.8
MRE11P49959 MIR4272-201ENST00000635924 64 ntBASIC3.8□□□□□ -1.8
MRE11P49959 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
MRE11P49959 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MRE11P49959 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.8□□□□□ -1.8
MRE11P49959 AC008669.1-201ENST00000565823 2178 ntBASIC3.79□□□□□ -1.8
MRE11P49959 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MRE11P49959 AC110774.1-201ENST00000623567 2018 ntBASIC3.79□□□□□ -1.8
MRE11P49959 SNORA63.7-201ENST00000365579 123 ntBASIC3.79□□□□□ -1.8
MRE11P49959 Y_RNA.380-201ENST00000365663 111 ntBASIC3.79□□□□□ -1.8
MRE11P49959 Y_RNA.556-201ENST00000384677 113 ntBASIC3.79□□□□□ -1.8
MRE11P49959 AL138885.1-201ENST00000405921 675 ntBASIC3.79□□□□□ -1.8
MRE11P49959 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MRE11P49959 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.79□□□□□ -1.8
MRE11P49959 AL592148.1-201ENST00000413568 445 ntBASIC3.79□□□□□ -1.8
MRE11P49959 AL096701.2-201ENST00000416920 238 ntBASIC3.79□□□□□ -1.8
MRE11P49959 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.79□□□□□ -1.8
MRE11P49959 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MRE11P49959 MYL8P-204ENST00000431574 518 ntBASIC3.79□□□□□ -1.8
MRE11P49959 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.79□□□□□ -1.8
MRE11P49959 RN7SL504P-201ENST00000494496 287 ntBASIC3.79□□□□□ -1.8
MRE11P49959 MIR3921-201ENST00000577308 85 ntBASIC3.79□□□□□ -1.8
MRE11P49959 MIR4273-201ENST00000582824 84 ntBASIC3.79□□□□□ -1.8
MRE11P49959 AC100812.1-201ENST00000607622 580 ntBASIC3.79□□□□□ -1.8
MRE11P49959 AL021879.1-201ENST00000611756 288 ntBASIC3.79□□□□□ -1.8
MRE11P49959 AC138627.2-201ENST00000624202 601 ntBASIC3.79□□□□□ -1.8
MRE11P49959 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.79□□□□□ -1.8
MRE11P49959 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.79□□□□□ -1.8
MRE11P49959 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.79□□□□□ -1.8
MRE11P49959 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
MRE11P49959 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
MRE11P49959 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
MRE11P49959 MIR412-201ENST00000362142 91 ntBASIC3.78□□□□□ -1.8
MRE11P49959 RNY1P16-201ENST00000363063 111 ntBASIC3.78□□□□□ -1.8
MRE11P49959 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.78□□□□□ -1.8
MRE11P49959 Y_RNA.476-201ENST00000384347 108 ntBASIC3.78□□□□□ -1.8
MRE11P49959 AL513475.1-201ENST00000406602 315 ntBASIC3.78□□□□□ -1.8
MRE11P49959 AL591034.1-201ENST00000407447 340 ntBASIC3.78□□□□□ -1.8
MRE11P49959 RNU6-1156P-201ENST00000410365 100 ntBASIC3.78□□□□□ -1.8
MRE11P49959 NDUFB4P7-201ENST00000423198 363 ntBASIC3.78□□□□□ -1.8
MRE11P49959 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.78□□□□□ -1.8
MRE11P49959 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.78□□□□□ -1.8
MRE11P49959 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.78□□□□□ -1.8
MRE11P49959 FO393415.2-201ENST00000480085 343 ntBASIC3.78□□□□□ -1.8
MRE11P49959 AC114801.2-201ENST00000503825 781 ntBASIC3.78□□□□□ -1.8
MRE11P49959 Y_RNA.668-201ENST00000516233 93 ntBASIC3.78□□□□□ -1.8
MRE11P49959 RNU6-1256P-201ENST00000516539 103 ntBASIC3.78□□□□□ -1.8
MRE11P49959 Z98751.3-201ENST00000604447 521 ntBASIC3.78□□□□□ -1.8
MRE11P49959 MIR3976-201ENST00000606807 139 ntBASIC3.78□□□□□ -1.8
MRE11P49959 AC107871.2-201ENST00000612894 502 ntBASIC3.78□□□□□ -1.8
MRE11P49959 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.78□□□□□ -1.8
MRE11P49959 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.78□□□□□ -1.8
MRE11P49959 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
MRE11P49959 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.78□□□□□ -1.8
MRE11P49959 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
MRE11P49959 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.77□□□□□ -1.81
MRE11P49959 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
MRE11P49959 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms