Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.12□□□□□ -1.91
MMP13P45452 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.12□□□□□ -1.91
MMP13P45452 HMGB1P27-201ENST00000431429 603 ntBASIC3.12□□□□□ -1.91
MMP13P45452 RPS15AP10-201ENST00000432472 382 ntBASIC3.12□□□□□ -1.91
MMP13P45452 RPL23AP50-201ENST00000434149 455 ntBASIC3.12□□□□□ -1.91
MMP13P45452 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.12□□□□□ -1.91
MMP13P45452 HIGD1AP2-201ENST00000446367 280 ntBASIC3.12□□□□□ -1.91
MMP13P45452 AL031274.1-201ENST00000450334 232 ntBASIC3.12□□□□□ -1.91
MMP13P45452 PCNPP5-201ENST00000452246 481 ntBASIC3.12□□□□□ -1.91
MMP13P45452 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.12□□□□□ -1.91
MMP13P45452 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.12□□□□□ -1.91
MMP13P45452 PCMTD1P1-201ENST00000455560 355 ntBASIC3.12□□□□□ -1.91
MMP13P45452 AC008571.1-201ENST00000467232 300 ntBASIC3.12□□□□□ -1.91
MMP13P45452 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.12□□□□□ -1.91
MMP13P45452 AC011005.2-201ENST00000487324 359 ntBASIC3.12□□□□□ -1.91
MMP13P45452 RN7SL633P-201ENST00000488974 297 ntBASIC3.12□□□□□ -1.91
MMP13P45452 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.12□□□□□ -1.91
MMP13P45452 AC008716.1-201ENST00000511084 513 ntBASIC3.12□□□□□ -1.91
MMP13P45452 AC010265.1-201ENST00000513509 211 ntBASIC3.12□□□□□ -1.91
MMP13P45452 RNU6-1315P-201ENST00000517187 99 ntBASIC3.12□□□□□ -1.91
MMP13P45452 AC084851.1-201ENST00000529105 249 ntBASIC3.12□□□□□ -1.91
MMP13P45452 GNAI2P1-201ENST00000541815 315 ntBASIC3.12□□□□□ -1.91
MMP13P45452 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.12□□□□□ -1.91
MMP13P45452 CPDP1-201ENST00000579660 283 ntBASIC3.12□□□□□ -1.91
MMP13P45452 MIR5188-201ENST00000583467 113 ntBASIC3.12□□□□□ -1.91
MMP13P45452 MIR5195-201ENST00000583555 115 ntBASIC3.12□□□□□ -1.91
MMP13P45452 OR1M4P-201ENST00000589199 287 ntBASIC3.12□□□□□ -1.91
MMP13P45452 AC012493.2-201ENST00000595083 291 ntBASIC3.12□□□□□ -1.91
MMP13P45452 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.12□□□□□ -1.91
MMP13P45452 AL442067.1-201ENST00000613261 223 ntBASIC3.12□□□□□ -1.91
MMP13P45452 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.12□□□□□ -1.91
MMP13P45452 MIR4275-201ENST00000636486 87 ntBASIC3.12□□□□□ -1.91
MMP13P45452 AL035425.3-201ENST00000564206 4996 ntBASIC3.12□□□□□ -1.91
MMP13P45452 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
MMP13P45452 MAPK10-322ENST00000641485 4530 ntBASIC3.12□□□□□ -1.91
MMP13P45452 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.11□□□□□ -1.91
MMP13P45452 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
MMP13P45452 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
MMP13P45452 RNU6-1167P-201ENST00000363227 94 ntBASIC3.11□□□□□ -1.91
MMP13P45452 Y_RNA.222-201ENST00000364264 102 ntBASIC3.11□□□□□ -1.91
MMP13P45452 RNU6-806P-201ENST00000365147 105 ntBASIC3.11□□□□□ -1.91
MMP13P45452 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.11□□□□□ -1.91
MMP13P45452 RPL21P1-201ENST00000399532 476 ntBASIC3.11□□□□□ -1.91
MMP13P45452 TMEM167AP1-201ENST00000423409 219 ntBASIC3.11□□□□□ -1.91
MMP13P45452 USP9YP16-201ENST00000430287 407 ntBASIC3.11□□□□□ -1.91
MMP13P45452 NDUFB4P6-201ENST00000436819 366 ntBASIC3.11□□□□□ -1.91
MMP13P45452 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.11□□□□□ -1.91
MMP13P45452 USP9YP23-201ENST00000455085 407 ntBASIC3.11□□□□□ -1.91
MMP13P45452 AC087588.1-201ENST00000462203 316 ntBASIC3.11□□□□□ -1.91
MMP13P45452 RPL31P60-201ENST00000478450 367 ntBASIC3.11□□□□□ -1.91
MMP13P45452 RPL30P14-201ENST00000482744 348 ntBASIC3.11□□□□□ -1.91
MMP13P45452 AC114801.2-201ENST00000503825 781 ntBASIC3.11□□□□□ -1.91
MMP13P45452 RN7SKP272-201ENST00000516988 232 ntBASIC3.11□□□□□ -1.91
MMP13P45452 AC131281.1-201ENST00000522984 164 ntBASIC3.11□□□□□ -1.91
MMP13P45452 AC007536.1-201ENST00000533382 349 ntBASIC3.11□□□□□ -1.91
MMP13P45452 AL157871.3-201ENST00000557231 293 ntBASIC3.11□□□□□ -1.91
MMP13P45452 MIR6733-201ENST00000635723 61 ntBASIC3.11□□□□□ -1.91
MMP13P45452 AC103988.1-201ENST00000566382 2177 ntBASIC3.11□□□□□ -1.91
MMP13P45452 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
MMP13P45452 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
MMP13P45452 AL079305.1-201ENST00000623159 3008 ntBASIC3.1□□□□□ -1.91
MMP13P45452 MIR22-201ENST00000362190 85 ntBASIC3.1□□□□□ -1.91
MMP13P45452 Y_RNA.210-201ENST00000364161 110 ntBASIC3.1□□□□□ -1.91
MMP13P45452 RNU4-42P-201ENST00000364738 142 ntBASIC3.1□□□□□ -1.91
MMP13P45452 Y_RNA.314-201ENST00000365114 102 ntBASIC3.1□□□□□ -1.91
MMP13P45452 RNU6-596P-201ENST00000365395 98 ntBASIC3.1□□□□□ -1.91
MMP13P45452 SNORA70.4-201ENST00000365509 134 ntBASIC3.1□□□□□ -1.91
MMP13P45452 SNORA54-201ENST00000384281 123 ntBASIC3.1□□□□□ -1.91
MMP13P45452 AL138885.1-201ENST00000405921 675 ntBASIC3.1□□□□□ -1.91
MMP13P45452 RNU6-293P-201ENST00000411259 106 ntBASIC3.1□□□□□ -1.91
MMP13P45452 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.1□□□□□ -1.91
MMP13P45452 AL451074.5-201ENST00000415894 435 ntBASIC3.1□□□□□ -1.91
MMP13P45452 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.1□□□□□ -1.91
MMP13P45452 FABP5P15-201ENST00000453566 214 ntBASIC3.1□□□□□ -1.91
MMP13P45452 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.1□□□□□ -1.91
MMP13P45452 RPL22P13-201ENST00000493291 347 ntBASIC3.1□□□□□ -1.91
MMP13P45452 AL359273.1-201ENST00000510918 627 ntBASIC3.1□□□□□ -1.91
MMP13P45452 RNU6-475P-201ENST00000516073 104 ntBASIC3.1□□□□□ -1.91
MMP13P45452 AC009812.2-201ENST00000517657 457 ntBASIC3.1□□□□□ -1.91
MMP13P45452 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MMP13P45452 AP000889.1-201ENST00000530968 660 ntBASIC3.1□□□□□ -1.91
MMP13P45452 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.1□□□□□ -1.91
MMP13P45452 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.1□□□□□ -1.91
MMP13P45452 MIR1273C-201ENST00000578669 77 ntBASIC3.1□□□□□ -1.91
MMP13P45452 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.1□□□□□ -1.91
MMP13P45452 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.1□□□□□ -1.91
MMP13P45452 AL021879.1-201ENST00000611756 288 ntBASIC3.1□□□□□ -1.91
MMP13P45452 AC090132.2-201ENST00000615881 347 ntBASIC3.1□□□□□ -1.91
MMP13P45452 MIR8057-201ENST00000620957 69 ntBASIC3.1□□□□□ -1.91
MMP13P45452 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.1□□□□□ -1.91
MMP13P45452 GABRG2-229ENST00000641017 3628 ntBASIC3.1□□□□□ -1.91
MMP13P45452 AC008568.2-201ENST00000623862 2313 ntBASIC3.09□□□□□ -1.91
MMP13P45452 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.09□□□□□ -1.91
MMP13P45452 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
MMP13P45452 AC073325.2-201ENST00000339545 159 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-37P-201ENST00000362692 107 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-11P-201ENST00000364234 107 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-1317P-201ENST00000364582 104 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-7-201ENST00000364784 107 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-8-201ENST00000365467 107 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms