Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 Y_RNA.164-201ENST00000363709 102 ntBASIC1.49□□□□□ -2.17
RFC3P40938 RNU5E-5P-201ENST00000365379 116 ntBASIC1.49□□□□□ -2.17
RFC3P40938 MIR597-201ENST00000384968 97 ntBASIC1.49□□□□□ -2.17
RFC3P40938 BTF3L4P2-201ENST00000392798 346 ntBASIC1.49□□□□□ -2.17
RFC3P40938 RPL23AP32-201ENST00000395315 459 ntBASIC1.49□□□□□ -2.17
RFC3P40938 RNU6-387P-201ENST00000411331 105 ntBASIC1.49□□□□□ -2.17
RFC3P40938 RNA5SP111-201ENST00000411386 101 ntBASIC1.49□□□□□ -2.17
RFC3P40938 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.49□□□□□ -2.17
RFC3P40938 RPS15AP10-201ENST00000432472 382 ntBASIC1.49□□□□□ -2.17
RFC3P40938 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.49□□□□□ -2.17
RFC3P40938 RPL30P6-201ENST00000475925 342 ntBASIC1.49□□□□□ -2.17
RFC3P40938 Y_RNA.672-201ENST00000516289 104 ntBASIC1.49□□□□□ -2.17
RFC3P40938 RNU6-685P-201ENST00000517088 95 ntBASIC1.49□□□□□ -2.17
RFC3P40938 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.49□□□□□ -2.17
RFC3P40938 AP005660.1-201ENST00000522972 293 ntBASIC1.49□□□□□ -2.17
RFC3P40938 AC022616.3-201ENST00000523940 148 ntBASIC1.49□□□□□ -2.17
RFC3P40938 AC022878.1-201ENST00000530684 149 ntBASIC1.49□□□□□ -2.17
RFC3P40938 CBX3P4-201ENST00000538909 354 ntBASIC1.49□□□□□ -2.17
RFC3P40938 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
RFC3P40938 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.49□□□□□ -2.17
RFC3P40938 AC091135.1-201ENST00000585943 307 ntBASIC1.49□□□□□ -2.17
RFC3P40938 WISP1-OT1-201ENST00000602893 642 ntBASIC1.49□□□□□ -2.17
RFC3P40938 CYP2C61P-201ENST00000604072 290 ntBASIC1.49□□□□□ -2.17
RFC3P40938 AC112191.3-201ENST00000604371 277 ntBASIC1.49□□□□□ -2.17
RFC3P40938 AC016727.1-205ENST00000605437 569 ntBASIC1.49□□□□□ -2.17
RFC3P40938 AL022345.1-201ENST00000607292 135 ntBASIC1.49□□□□□ -2.17
RFC3P40938 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.49□□□□□ -2.17
RFC3P40938 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
RFC3P40938 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.49□□□□□ -2.17
RFC3P40938 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
RFC3P40938 Y_RNA.99-201ENST00000363138 105 ntBASIC1.48□□□□□ -2.17
RFC3P40938 Y_RNA.597-201ENST00000410463 100 ntBASIC1.48□□□□□ -2.17
RFC3P40938 RNU2-8P-201ENST00000410727 190 ntBASIC1.48□□□□□ -2.17
RFC3P40938 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.48□□□□□ -2.17
RFC3P40938 MTND4P20-201ENST00000424125 869 ntBASIC1.48□□□□□ -2.17
RFC3P40938 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.48□□□□□ -2.17
RFC3P40938 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.48□□□□□ -2.17
RFC3P40938 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.48□□□□□ -2.17
RFC3P40938 AC007969.2-201ENST00000441891 191 ntBASIC1.48□□□□□ -2.17
RFC3P40938 USP9YP12-201ENST00000450481 570 ntBASIC1.48□□□□□ -2.17
RFC3P40938 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.48□□□□□ -2.17
RFC3P40938 RNA5SP57-201ENST00000459463 123 ntBASIC1.48□□□□□ -2.17
RFC3P40938 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.48□□□□□ -2.17
RFC3P40938 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.48□□□□□ -2.17
RFC3P40938 RNU6-970P-201ENST00000516312 107 ntBASIC1.48□□□□□ -2.17
RFC3P40938 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.48□□□□□ -2.17
RFC3P40938 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.48□□□□□ -2.17
RFC3P40938 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.48□□□□□ -2.17
RFC3P40938 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
RFC3P40938 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.48□□□□□ -2.17
RFC3P40938 AL645939.4-201ENST00000604495 135 ntBASIC1.48□□□□□ -2.17
RFC3P40938 RMST_6.1-201ENST00000611980 203 ntBASIC1.48□□□□□ -2.17
RFC3P40938 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.48□□□□□ -2.17
RFC3P40938 AC099842.1-201ENST00000619919 596 ntBASIC1.48□□□□□ -2.17
RFC3P40938 AC019226.2-201ENST00000625973 424 ntBASIC1.48□□□□□ -2.17
RFC3P40938 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
RFC3P40938 RNU1-42P-201ENST00000364033 160 ntBASIC1.47□□□□□ -2.17
RFC3P40938 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.47□□□□□ -2.17
RFC3P40938 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.47□□□□□ -2.17
RFC3P40938 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.47□□□□□ -2.17
RFC3P40938 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.47□□□□□ -2.17
RFC3P40938 AL360221.1-201ENST00000445989 335 ntBASIC1.47□□□□□ -2.17
RFC3P40938 RPL39P29-201ENST00000447779 157 ntBASIC1.47□□□□□ -2.17
RFC3P40938 MTND2P33-201ENST00000506452 1031 ntBASIC1.47□□□□□ -2.17
RFC3P40938 AC093259.1-201ENST00000509755 300 ntBASIC1.47□□□□□ -2.17
RFC3P40938 AC008834.1-201ENST00000511612 175 ntBASIC1.47□□□□□ -2.17
RFC3P40938 RPL21P5-201ENST00000554662 472 ntBASIC1.47□□□□□ -2.17
RFC3P40938 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.47□□□□□ -2.17
RFC3P40938 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.47□□□□□ -2.17
RFC3P40938 AC015720.1-201ENST00000565251 277 ntBASIC1.47□□□□□ -2.17
RFC3P40938 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RFC3P40938 RNU6-179P-201ENST00000363350 107 ntBASIC1.46□□□□□ -2.18
RFC3P40938 RNU6-743P-201ENST00000364151 106 ntBASIC1.46□□□□□ -2.18
RFC3P40938 RNY1P12-201ENST00000364251 105 ntBASIC1.46□□□□□ -2.18
RFC3P40938 RNU5E-7P-201ENST00000365290 117 ntBASIC1.46□□□□□ -2.18
RFC3P40938 RN7SKP101-201ENST00000411376 320 ntBASIC1.46□□□□□ -2.18
RFC3P40938 POLHP1-201ENST00000411806 470 ntBASIC1.46□□□□□ -2.18
RFC3P40938 VN1R36P-201ENST00000414936 291 ntBASIC1.46□□□□□ -2.18
RFC3P40938 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.46□□□□□ -2.18
RFC3P40938 AL356583.2-201ENST00000426536 280 ntBASIC1.46□□□□□ -2.18
RFC3P40938 CALM2P2-201ENST00000428512 440 ntBASIC1.46□□□□□ -2.18
RFC3P40938 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.46□□□□□ -2.18
RFC3P40938 EPS15P1-201ENST00000448836 336 ntBASIC1.46□□□□□ -2.18
RFC3P40938 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.46□□□□□ -2.18
RFC3P40938 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.46□□□□□ -2.18
RFC3P40938 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.46□□□□□ -2.18
RFC3P40938 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.46□□□□□ -2.18
RFC3P40938 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.46□□□□□ -2.18
RFC3P40938 DNAJC19P9-201ENST00000555084 351 ntBASIC1.46□□□□□ -2.18
RFC3P40938 AC137800.2-201ENST00000574375 120 ntBASIC1.46□□□□□ -2.18
RFC3P40938 SNORD53B-201ENST00000577887 78 ntBASIC1.46□□□□□ -2.18
RFC3P40938 MIR4285-201ENST00000581001 85 ntBASIC1.46□□□□□ -2.18
RFC3P40938 AC022022.2-201ENST00000602989 360 ntBASIC1.46□□□□□ -2.18
RFC3P40938 AC091304.9-201ENST00000612091 226 ntBASIC1.46□□□□□ -2.18
RFC3P40938 AC063943.3-201ENST00000615562 356 ntBASIC1.46□□□□□ -2.18
RFC3P40938 AC131159.1-201ENST00000621854 213 ntBASIC1.46□□□□□ -2.18
RFC3P40938 AL359740.1-201ENST00000624340 592 ntBASIC1.46□□□□□ -2.18
RFC3P40938 MIR1248-201ENST00000629190 106 ntBASIC1.46□□□□□ -2.18
RFC3P40938 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
RFC3P40938 SNORA62.1-201ENST00000364287 154 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms