Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 HMGN2P19-201ENST00000425149 265 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 TOMM20P4-201ENST00000427861 435 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 AC132479.1-201ENST00000449160 144 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 AC012308.1-201ENST00000451232 178 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 AC006026.2-201ENST00000457376 180 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 RPL23AP42-201ENST00000471152 471 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 CKS1BP2-201ENST00000497342 240 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.83□□□□□ -2.12
SHMT2P34897 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.83□□□□□ -2.12
SHMT2P34897 MTCYBP40-201ENST00000509390 1135 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SHMT2P34897 AC104136.1-201ENST00000512969 394 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 RNU2-53P-201ENST00000516257 147 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 RNU6-1178P-201ENST00000516674 107 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 RNU7-193P-201ENST00000516723 65 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.83□□□□□ -2.12
SHMT2P34897 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.83□□□□□ -2.12
SHMT2P34897 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.83□□□□□ -2.12
SHMT2P34897 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.83□□□□□ -2.12
SHMT2P34897 SUB1P2-201ENST00000556401 297 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 AC110588.1-201ENST00000559699 137 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.83□□□□□ -2.12
SHMT2P34897 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.83□□□□□ -2.12
SHMT2P34897 AC068790.2-201ENST00000602601 557 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 AL109918.3-201ENST00000603072 338 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 AC008945.2-201ENST00000606056 604 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 uc_338.15-201ENST00000615470 191 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 AC072046.2-201ENST00000618366 268 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 AC136475.10-201ENST00000620253 385 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 Z69720.2-201ENST00000624755 279 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.83□□□□□ -2.12
SHMT2P34897 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SHMT2P34897 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.83□□□□□ -2.12
SHMT2P34897 AL390237.1-201ENST00000404226 1415 ntBASIC1.83□□□□□ -2.12
SHMT2P34897 ELL2P3-201ENST00000457883 1602 ntBASIC1.82□□□□□ -2.12
SHMT2P34897 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SHMT2P34897 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SHMT2P34897 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SHMT2P34897 RNU6-606P-201ENST00000384721 111 ntBASIC1.82□□□□□ -2.12
SHMT2P34897 RNU2-20P-201ENST00000410425 191 ntBASIC1.82□□□□□ -2.12
SHMT2P34897 RN7SKP158-201ENST00000410453 326 ntBASIC1.82□□□□□ -2.12
SHMT2P34897 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.82□□□□□ -2.12
SHMT2P34897 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.82□□□□□ -2.12
SHMT2P34897 MTND1P18-201ENST00000448191 573 ntBASIC1.82□□□□□ -2.12
SHMT2P34897 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.82□□□□□ -2.12
SHMT2P34897 RNU6-956P-201ENST00000458868 103 ntBASIC1.82□□□□□ -2.12
SHMT2P34897 snoU13.14-201ENST00000459372 104 ntBASIC1.82□□□□□ -2.12
SHMT2P34897 AL121594.1-201ENST00000475906 575 ntBASIC1.82□□□□□ -2.12
SHMT2P34897 RPL21P99-201ENST00000480369 423 ntBASIC1.82□□□□□ -2.12
SHMT2P34897 AC018868.1-201ENST00000491307 315 ntBASIC1.82□□□□□ -2.12
SHMT2P34897 MRPS17P9-201ENST00000511924 393 ntBASIC1.82□□□□□ -2.12
SHMT2P34897 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.82□□□□□ -2.12
SHMT2P34897 AC074344.1-201ENST00000512823 224 ntBASIC1.82□□□□□ -2.12
SHMT2P34897 RNU2-44P-201ENST00000516795 194 ntBASIC1.82□□□□□ -2.12
SHMT2P34897 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.82□□□□□ -2.12
SHMT2P34897 IMMP1LP2-201ENST00000552954 492 ntBASIC1.82□□□□□ -2.12
SHMT2P34897 AL391840.1-201ENST00000571144 367 ntBASIC1.82□□□□□ -2.12
SHMT2P34897 AC025449.1-201ENST00000603896 529 ntBASIC1.82□□□□□ -2.12
SHMT2P34897 AC025811.1-201ENST00000604312 472 ntBASIC1.82□□□□□ -2.12
SHMT2P34897 AP001596.2-201ENST00000608410 312 ntBASIC1.82□□□□□ -2.12
SHMT2P34897 AC022079.1-201ENST00000621546 602 ntBASIC1.82□□□□□ -2.12
SHMT2P34897 AC008555.8-201ENST00000623602 2168 ntBASIC1.82□□□□□ -2.12
SHMT2P34897 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.82□□□□□ -2.12
SHMT2P34897 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.81□□□□□ -2.12
SHMT2P34897 SNORD56.1-201ENST00000362913 68 ntBASIC1.81□□□□□ -2.12
SHMT2P34897 Y_RNA.77-201ENST00000362962 107 ntBASIC1.81□□□□□ -2.12
SHMT2P34897 RNU6-529P-201ENST00000363383 104 ntBASIC1.81□□□□□ -2.12
SHMT2P34897 Y_RNA.159-201ENST00000363674 87 ntBASIC1.81□□□□□ -2.12
SHMT2P34897 SNORA16B-201ENST00000364674 135 ntBASIC1.81□□□□□ -2.12
SHMT2P34897 RNU5E-7P-201ENST00000365290 117 ntBASIC1.81□□□□□ -2.12
SHMT2P34897 U8.13-201ENST00000390842 128 ntBASIC1.81□□□□□ -2.12
SHMT2P34897 MIR1289-2-201ENST00000408360 111 ntBASIC1.81□□□□□ -2.12
SHMT2P34897 RNU2-9P-201ENST00000410194 145 ntBASIC1.81□□□□□ -2.12
SHMT2P34897 AIMP1P2-201ENST00000425294 312 ntBASIC1.81□□□□□ -2.12
SHMT2P34897 AC009238.1-201ENST00000442165 424 ntBASIC1.81□□□□□ -2.12
SHMT2P34897 AC009237.6-201ENST00000446969 424 ntBASIC1.81□□□□□ -2.12
SHMT2P34897 AC107393.1-201ENST00000512403 346 ntBASIC1.81□□□□□ -2.12
SHMT2P34897 AP005435.4-201ENST00000529514 284 ntBASIC1.81□□□□□ -2.12
SHMT2P34897 AL356057.1-201ENST00000533798 831 ntBASIC1.81□□□□□ -2.12
SHMT2P34897 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SHMT2P34897 AC012493.3-201ENST00000604494 112 ntBASIC1.81□□□□□ -2.12
SHMT2P34897 uc_338.11-201ENST00000619132 160 ntBASIC1.81□□□□□ -2.12
SHMT2P34897 AC097520.1-201ENST00000624435 385 ntBASIC1.81□□□□□ -2.12
SHMT2P34897 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.81□□□□□ -2.12
SHMT2P34897 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
SHMT2P34897 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.81□□□□□ -2.12
SHMT2P34897 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
SHMT2P34897 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SHMT2P34897 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
SHMT2P34897 AL356292.1-201ENST00000283110 373 ntBASIC1.8□□□□□ -2.12
SHMT2P34897 RNU6-1127P-201ENST00000384580 107 ntBASIC1.8□□□□□ -2.12
SHMT2P34897 MIR504-201ENST00000385065 83 ntBASIC1.8□□□□□ -2.12
SHMT2P34897 RNA5SP390-201ENST00000410191 113 ntBASIC1.8□□□□□ -2.12
SHMT2P34897 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.8□□□□□ -2.12
SHMT2P34897 AC007969.2-201ENST00000441891 191 ntBASIC1.8□□□□□ -2.12
SHMT2P34897 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.8□□□□□ -2.12
SHMT2P34897 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.8□□□□□ -2.12
SHMT2P34897 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.8□□□□□ -2.12
SHMT2P34897 AC118273.2-201ENST00000532092 465 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms