Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RNU2-49P-201ENST00000410666 184 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 RN7SKP58-201ENST00000411010 305 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 RNU2-25P-201ENST00000411041 191 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 AC096920.1-201ENST00000423991 241 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 PTGES3P4-201ENST00000426243 356 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 BX679664.1-201ENST00000434429 253 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXC12P31275 RPS15AP7-201ENST00000439294 405 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 RPS29P7-201ENST00000439662 171 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXC12P31275 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC12P31275 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC12P31275 AC006499.6-201ENST00000511169 607 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 AC099522.1-202ENST00000514718 367 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 RNU6-1114P-201ENST00000516022 107 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 IFITM8P-201ENST00000522529 394 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXC12P31275 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HOXC12P31275 AC021231.3-201ENST00000558497 370 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 AC136932.1-201ENST00000574771 208 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 AC022655.2-201ENST00000577280 318 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 AC005296.1-201ENST00000616145 209 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 CR392039.5-201ENST00000623201 510 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 LINC02555-201ENST00000563933 1951 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HOXC12P31275 AC110774.1-201ENST00000623567 2018 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC12P31275 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC12P31275 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.66□□□□□ -1.82
HOXC12P31275 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
HOXC12P31275 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC12P31275 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC12P31275 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC12P31275 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
HOXC12P31275 AC092268.1-201ENST00000342691 405 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 SNORA63.1-201ENST00000362493 131 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 SNORA20.1-201ENST00000364790 130 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 RNU6-487P-201ENST00000365430 104 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 Y_RNA.552-201ENST00000384665 112 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 MIR487A-201ENST00000385009 80 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 RNU6-1093P-201ENST00000391194 107 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 AL133475.1-201ENST00000404414 305 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 RPL21P65-201ENST00000406094 466 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 ARL5AP4-201ENST00000430731 512 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 GOT2P5-201ENST00000433995 546 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXC12P31275 AL133547.1-201ENST00000448546 220 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 RNU7-23P-201ENST00000459465 62 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.66□□□□□ -1.82
HOXC12P31275 AP002884.2-201ENST00000471647 395 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 MTND1P19-201ENST00000511780 315 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.66□□□□□ -1.82
HOXC12P31275 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXC12P31275 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXC12P31275 MIR4300-201ENST00000581016 96 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 AC020914.4-201ENST00000597690 277 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 AC091152.3-201ENST00000604227 325 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 AL138963.2-201ENST00000605137 226 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 AC069200.1-201ENST00000609511 323 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 SDR42E1P4-201ENST00000620894 481 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 AC006111.3-201ENST00000622137 383 ntBASIC3.66□□□□□ -1.82
HOXC12P31275 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXC12P31275 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC12P31275 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
HOXC12P31275 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC12P31275 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC12P31275 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC12P31275 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC12P31275 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HOXC12P31275 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
HOXC12P31275 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.65□□□□□ -1.82
HOXC12P31275 U8.10-201ENST00000384260 133 ntBASIC3.65□□□□□ -1.83
HOXC12P31275 RNU6-318P-201ENST00000384283 103 ntBASIC3.65□□□□□ -1.83
HOXC12P31275 RNU1-139P-201ENST00000391307 165 ntBASIC3.65□□□□□ -1.83
HOXC12P31275 RNU6-1140P-201ENST00000410517 106 ntBASIC3.65□□□□□ -1.83
HOXC12P31275 RNU6-1203P-201ENST00000410703 110 ntBASIC3.65□□□□□ -1.83
HOXC12P31275 AC245291.1-201ENST00000419501 328 ntBASIC3.65□□□□□ -1.83
HOXC12P31275 Z98949.2-201ENST00000440996 144 ntBASIC3.65□□□□□ -1.83
HOXC12P31275 snoU13.6-201ENST00000458785 104 ntBASIC3.65□□□□□ -1.83
HOXC12P31275 RNA5SP246-201ENST00000458909 119 ntBASIC3.65□□□□□ -1.83
HOXC12P31275 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXC12P31275 RPS26P28-201ENST00000470806 348 ntBASIC3.65□□□□□ -1.83
HOXC12P31275 HMGB1P35-201ENST00000503360 598 ntBASIC3.65□□□□□ -1.83
HOXC12P31275 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.65□□□□□ -1.83
HOXC12P31275 RNU6-1198P-201ENST00000516904 67 ntBASIC3.65□□□□□ -1.83
HOXC12P31275 AC069240.1-201ENST00000548774 375 ntBASIC3.65□□□□□ -1.83
HOXC12P31275 AC027288.2-201ENST00000553028 243 ntBASIC3.65□□□□□ -1.83
HOXC12P31275 UBL5P4-201ENST00000562584 236 ntBASIC3.65□□□□□ -1.83
HOXC12P31275 MIR5695-201ENST00000579717 85 ntBASIC3.65□□□□□ -1.83
HOXC12P31275 AC012433.1-201ENST00000588916 398 ntBASIC3.65□□□□□ -1.83
HOXC12P31275 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXC12P31275 AL442067.1-201ENST00000613261 223 ntBASIC3.65□□□□□ -1.83
HOXC12P31275 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HOXC12P31275 AC012442.3-202ENST00000636742 206 ntBASIC3.65□□□□□ -1.83
HOXC12P31275 AL450472.1-202ENST00000637286 180 ntBASIC3.65□□□□□ -1.83
HOXC12P31275 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXC12P31275 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HOXC12P31275 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms