Protein–RNA interactions for Protein: P29536

LMOD1, Leiomodin-1, humanhuman

Predicted RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMOD1P29536 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.79□□□□□ -1.64
LMOD1P29536 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LMOD1P29536 AC073073.2-201ENST00000609827 2578 ntBASIC4.78□□□□□ -1.64
LMOD1P29536 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.78□□□□□ -1.64
LMOD1P29536 Y_RNA.117-201ENST00000363294 101 ntBASIC4.78□□□□□ -1.64
LMOD1P29536 Y_RNA.785-201ENST00000384290 109 ntBASIC4.78□□□□□ -1.64
LMOD1P29536 Y_RNA.541-201ENST00000384640 113 ntBASIC4.78□□□□□ -1.64
LMOD1P29536 RNU2-20P-201ENST00000410425 191 ntBASIC4.78□□□□□ -1.64
LMOD1P29536 SNORD12B-201ENST00000410433 91 ntBASIC4.78□□□□□ -1.64
LMOD1P29536 Y_RNA.602-201ENST00000410535 92 ntBASIC4.78□□□□□ -1.64
LMOD1P29536 AL358075.3-201ENST00000426289 226 ntBASIC4.78□□□□□ -1.64
LMOD1P29536 RPL23AP82-202ENST00000427528 469 ntBASIC4.78□□□□□ -1.64
LMOD1P29536 AC244670.1-201ENST00000436879 112 ntBASIC4.78□□□□□ -1.64
LMOD1P29536 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.78□□□□□ -1.64
LMOD1P29536 RN7SKP18-201ENST00000516005 275 ntBASIC4.78□□□□□ -1.64
LMOD1P29536 RNU6-496P-201ENST00000516145 99 ntBASIC4.78□□□□□ -1.64
LMOD1P29536 RN7SKP49-201ENST00000516675 260 ntBASIC4.78□□□□□ -1.64
LMOD1P29536 HSPE1P7-201ENST00000604681 321 ntBASIC4.78□□□□□ -1.64
LMOD1P29536 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.78□□□□□ -1.64
LMOD1P29536 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.78□□□□□ -1.64
LMOD1P29536 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LMOD1P29536 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.77□□□□□ -1.65
LMOD1P29536 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMOD1P29536 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMOD1P29536 AC002546.1-201ENST00000588041 2504 ntBASIC4.77□□□□□ -1.65
LMOD1P29536 HSPA8P1-201ENST00000425843 1833 ntBASIC4.77□□□□□ -1.65
LMOD1P29536 AL133383.2-201ENST00000622958 2336 ntBASIC4.77□□□□□ -1.65
LMOD1P29536 SNORD115-8-201ENST00000363856 82 ntBASIC4.77□□□□□ -1.65
LMOD1P29536 SNORD115-38-201ENST00000365037 82 ntBASIC4.77□□□□□ -1.65
LMOD1P29536 MIR10B-201ENST00000385011 110 ntBASIC4.77□□□□□ -1.65
LMOD1P29536 RNU6-159P-201ENST00000391080 106 ntBASIC4.77□□□□□ -1.65
LMOD1P29536 AL133162.1-201ENST00000463228 453 ntBASIC4.77□□□□□ -1.65
LMOD1P29536 RN7SL585P-201ENST00000470538 280 ntBASIC4.77□□□□□ -1.65
LMOD1P29536 RPL32P34-201ENST00000486380 400 ntBASIC4.77□□□□□ -1.65
LMOD1P29536 AC025445.1-201ENST00000502728 300 ntBASIC4.77□□□□□ -1.65
LMOD1P29536 RNU4-71P-201ENST00000516258 113 ntBASIC4.77□□□□□ -1.65
LMOD1P29536 RNU6-182P-201ENST00000516970 105 ntBASIC4.77□□□□□ -1.65
LMOD1P29536 ACA59.2-201ENST00000517061 156 ntBASIC4.77□□□□□ -1.65
LMOD1P29536 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.77□□□□□ -1.65
LMOD1P29536 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.77□□□□□ -1.65
LMOD1P29536 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.77□□□□□ -1.65
LMOD1P29536 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
LMOD1P29536 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMOD1P29536 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LMOD1P29536 AF117829.1-206ENST00000621883 3802 ntBASIC4.77□□□□□ -1.65
LMOD1P29536 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMOD1P29536 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LMOD1P29536 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.77□□□□□ -1.65
LMOD1P29536 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMOD1P29536 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMOD1P29536 Y_RNA.16-201ENST00000362421 102 ntBASIC4.76□□□□□ -1.65
LMOD1P29536 RNU4-90P-201ENST00000362773 141 ntBASIC4.76□□□□□ -1.65
LMOD1P29536 RNY1-201ENST00000364228 113 ntBASIC4.76□□□□□ -1.65
LMOD1P29536 RNU6-926P-201ENST00000384075 107 ntBASIC4.76□□□□□ -1.65
LMOD1P29536 RNU6-281P-201ENST00000384212 103 ntBASIC4.76□□□□□ -1.65
LMOD1P29536 AC005300.1-201ENST00000428401 373 ntBASIC4.76□□□□□ -1.65
LMOD1P29536 WARS2P1-201ENST00000429678 537 ntBASIC4.76□□□□□ -1.65
LMOD1P29536 MTND5P15-201ENST00000434246 349 ntBASIC4.76□□□□□ -1.65
LMOD1P29536 RPL39P29-201ENST00000447779 157 ntBASIC4.76□□□□□ -1.65
LMOD1P29536 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.76□□□□□ -1.65
LMOD1P29536 AL139109.1-201ENST00000455491 297 ntBASIC4.76□□□□□ -1.65
LMOD1P29536 RNU6-58P-201ENST00000517143 103 ntBASIC4.76□□□□□ -1.65
LMOD1P29536 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.76□□□□□ -1.65
LMOD1P29536 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.76□□□□□ -1.65
LMOD1P29536 AC090897.2-201ENST00000581715 130 ntBASIC4.76□□□□□ -1.65
LMOD1P29536 MIR3922-201ENST00000585192 84 ntBASIC4.76□□□□□ -1.65
LMOD1P29536 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMOD1P29536 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMOD1P29536 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMOD1P29536 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.76□□□□□ -1.65
LMOD1P29536 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMOD1P29536 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMOD1P29536 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMOD1P29536 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
LMOD1P29536 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
LMOD1P29536 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LMOD1P29536 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.75□□□□□ -1.65
LMOD1P29536 Y_RNA.54-201ENST00000362766 105 ntBASIC4.75□□□□□ -1.65
LMOD1P29536 RNU6-622P-201ENST00000384272 103 ntBASIC4.75□□□□□ -1.65
LMOD1P29536 RNA5SP306-201ENST00000411087 107 ntBASIC4.75□□□□□ -1.65
LMOD1P29536 RNA5SP39-201ENST00000411245 120 ntBASIC4.75□□□□□ -1.65
LMOD1P29536 AC006517.1-201ENST00000480485 328 ntBASIC4.75□□□□□ -1.65
LMOD1P29536 RNU7-143P-201ENST00000516781 65 ntBASIC4.75□□□□□ -1.65
LMOD1P29536 AC022080.3-201ENST00000544433 482 ntBASIC4.75□□□□□ -1.65
LMOD1P29536 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.75□□□□□ -1.65
LMOD1P29536 AL359198.2-201ENST00000611836 194 ntBASIC4.75□□□□□ -1.65
LMOD1P29536 AC002076.2-201ENST00000617362 122 ntBASIC4.75□□□□□ -1.65
LMOD1P29536 SCARNA15.3-201ENST00000626315 122 ntBASIC4.75□□□□□ -1.65
LMOD1P29536 SCARNA4.1-201ENST00000628597 123 ntBASIC4.75□□□□□ -1.65
LMOD1P29536 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LMOD1P29536 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LMOD1P29536 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LMOD1P29536 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LMOD1P29536 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LMOD1P29536 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.74□□□□□ -1.65
LMOD1P29536 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.74□□□□□ -1.65
LMOD1P29536 AC018529.3-201ENST00000624212 2254 ntBASIC4.74□□□□□ -1.65
LMOD1P29536 RNU6-1266P-201ENST00000362794 105 ntBASIC4.74□□□□□ -1.65
LMOD1P29536 RNU6-290P-201ENST00000365212 101 ntBASIC4.74□□□□□ -1.65
LMOD1P29536 SNORA26.3-201ENST00000391119 136 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms