Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RN7SKP32-201ENST00000410167 303 ntBASIC2.09□□□□□ -2.07
HLA-DPA1P20036 SRIP3-201ENST00000413200 219 ntBASIC2.09□□□□□ -2.07
HLA-DPA1P20036 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
HLA-DPA1P20036 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DPA1P20036 BX510359.4-201ENST00000423750 193 ntBASIC2.09□□□□□ -2.07
HLA-DPA1P20036 CBX3P6-201ENST00000430257 527 ntBASIC2.09□□□□□ -2.07
HLA-DPA1P20036 RPS6P15-201ENST00000431996 751 ntBASIC2.09□□□□□ -2.07
HLA-DPA1P20036 IFNA20P-201ENST00000436840 528 ntBASIC2.09□□□□□ -2.07
HLA-DPA1P20036 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.09□□□□□ -2.07
HLA-DPA1P20036 MTND1P18-201ENST00000448191 573 ntBASIC2.09□□□□□ -2.07
HLA-DPA1P20036 AL513124.1-201ENST00000450410 614 ntBASIC2.09□□□□□ -2.07
HLA-DPA1P20036 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DPA1P20036 AC025033.1-201ENST00000463883 194 ntBASIC2.09□□□□□ -2.07
HLA-DPA1P20036 LRRC34P2-201ENST00000514850 553 ntBASIC2.09□□□□□ -2.07
HLA-DPA1P20036 RNU6-445P-201ENST00000516949 107 ntBASIC2.09□□□□□ -2.07
HLA-DPA1P20036 AC115990.1-201ENST00000526957 301 ntBASIC2.09□□□□□ -2.07
HLA-DPA1P20036 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DPA1P20036 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DPA1P20036 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DPA1P20036 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DPA1P20036 NIFKP6-201ENST00000598115 845 ntBASIC2.09□□□□□ -2.07
HLA-DPA1P20036 AC116312.1-201ENST00000606841 314 ntBASIC2.09□□□□□ -2.07
HLA-DPA1P20036 AC063944.3-201ENST00000609969 533 ntBASIC2.09□□□□□ -2.07
HLA-DPA1P20036 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.09□□□□□ -2.07
HLA-DPA1P20036 YWHAEP7-203ENST00000622054 312 ntBASIC2.09□□□□□ -2.07
HLA-DPA1P20036 MIR219B-201ENST00000637023 88 ntBASIC2.09□□□□□ -2.07
HLA-DPA1P20036 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HLA-DPA1P20036 RNU6-393P-201ENST00000384475 107 ntBASIC2.08□□□□□ -2.08
HLA-DPA1P20036 SNORA64-201ENST00000384674 134 ntBASIC2.08□□□□□ -2.08
HLA-DPA1P20036 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HLA-DPA1P20036 RNA5SP465-201ENST00000391195 109 ntBASIC2.08□□□□□ -2.08
HLA-DPA1P20036 GSTA9P-201ENST00000406231 611 ntBASIC2.08□□□□□ -2.08
HLA-DPA1P20036 MIR1283-2-201ENST00000408621 87 ntBASIC2.08□□□□□ -2.08
HLA-DPA1P20036 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.08□□□□□ -2.08
HLA-DPA1P20036 HMGN2P3-201ENST00000433603 273 ntBASIC2.08□□□□□ -2.08
HLA-DPA1P20036 HMGN2P5-201ENST00000436882 273 ntBASIC2.08□□□□□ -2.08
HLA-DPA1P20036 AC244505.5-201ENST00000443639 207 ntBASIC2.08□□□□□ -2.08
HLA-DPA1P20036 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.08□□□□□ -2.08
HLA-DPA1P20036 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.08□□□□□ -2.08
HLA-DPA1P20036 MTND1P27-201ENST00000451117 902 ntBASIC2.08□□□□□ -2.08
HLA-DPA1P20036 RPL21P99-201ENST00000480369 423 ntBASIC2.08□□□□□ -2.08
HLA-DPA1P20036 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.08□□□□□ -2.08
HLA-DPA1P20036 RNU5F-2P-201ENST00000516066 82 ntBASIC2.08□□□□□ -2.08
HLA-DPA1P20036 DUXAP5-201ENST00000529668 529 ntBASIC2.08□□□□□ -2.08
HLA-DPA1P20036 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.08□□□□□ -2.08
HLA-DPA1P20036 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.08□□□□□ -2.08
HLA-DPA1P20036 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.08□□□□□ -2.08
HLA-DPA1P20036 MIR4703-201ENST00000577728 79 ntBASIC2.08□□□□□ -2.08
HLA-DPA1P20036 AC091932.3-201ENST00000624223 323 ntBASIC2.08□□□□□ -2.08
HLA-DPA1P20036 AC009161.2-201ENST00000624626 138 ntBASIC2.08□□□□□ -2.08
HLA-DPA1P20036 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
HLA-DPA1P20036 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
HLA-DPA1P20036 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
HLA-DPA1P20036 AC092881.1-201ENST00000638218 2733 ntBASIC2.07□□□□□ -2.08
HLA-DPA1P20036 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.07□□□□□ -2.08
HLA-DPA1P20036 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.07□□□□□ -2.08
HLA-DPA1P20036 MIR1261-201ENST00000408659 82 ntBASIC2.07□□□□□ -2.08
HLA-DPA1P20036 RN7SKP284-201ENST00000411002 343 ntBASIC2.07□□□□□ -2.08
HLA-DPA1P20036 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.07□□□□□ -2.08
HLA-DPA1P20036 AC244636.1-201ENST00000421152 228 ntBASIC2.07□□□□□ -2.08
HLA-DPA1P20036 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DPA1P20036 MTND2P29-201ENST00000438595 412 ntBASIC2.07□□□□□ -2.08
HLA-DPA1P20036 AL021397.1-201ENST00000451806 248 ntBASIC2.07□□□□□ -2.08
HLA-DPA1P20036 AC090255.1-201ENST00000495779 349 ntBASIC2.07□□□□□ -2.08
HLA-DPA1P20036 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.07□□□□□ -2.08
HLA-DPA1P20036 AC092436.1-201ENST00000506450 503 ntBASIC2.07□□□□□ -2.08
HLA-DPA1P20036 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.07□□□□□ -2.08
HLA-DPA1P20036 AC009646.1-201ENST00000510455 318 ntBASIC2.07□□□□□ -2.08
HLA-DPA1P20036 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DPA1P20036 AC109479.2-201ENST00000517842 174 ntBASIC2.07□□□□□ -2.08
HLA-DPA1P20036 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DPA1P20036 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.07□□□□□ -2.08
HLA-DPA1P20036 AP005660.1-201ENST00000522972 293 ntBASIC2.07□□□□□ -2.08
HLA-DPA1P20036 AP002963.1-201ENST00000530590 184 ntBASIC2.07□□□□□ -2.08
HLA-DPA1P20036 AC023050.3-201ENST00000541142 333 ntBASIC2.07□□□□□ -2.08
HLA-DPA1P20036 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.07□□□□□ -2.08
HLA-DPA1P20036 AC009314.1-201ENST00000603871 304 ntBASIC2.07□□□□□ -2.08
HLA-DPA1P20036 AC005296.1-201ENST00000616145 209 ntBASIC2.07□□□□□ -2.08
HLA-DPA1P20036 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DPA1P20036 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DPA1P20036 KPNA2P1-201ENST00000458289 1591 ntBASIC2.06□□□□□ -2.08
HLA-DPA1P20036 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.06□□□□□ -2.08
HLA-DPA1P20036 RNU6-434P-201ENST00000384376 107 ntBASIC2.06□□□□□ -2.08
HLA-DPA1P20036 SNORA8-201ENST00000384574 139 ntBASIC2.06□□□□□ -2.08
HLA-DPA1P20036 SNORD70.1-201ENST00000391007 85 ntBASIC2.06□□□□□ -2.08
HLA-DPA1P20036 AL049545.1-201ENST00000401856 572 ntBASIC2.06□□□□□ -2.08
HLA-DPA1P20036 AL356432.1-201ENST00000405809 419 ntBASIC2.06□□□□□ -2.08
HLA-DPA1P20036 RNU2-40P-201ENST00000410833 196 ntBASIC2.06□□□□□ -2.08
HLA-DPA1P20036 RNU6-293P-201ENST00000411259 106 ntBASIC2.06□□□□□ -2.08
HLA-DPA1P20036 AC243964.1-201ENST00000441814 261 ntBASIC2.06□□□□□ -2.08
HLA-DPA1P20036 KATNBL1P3-201ENST00000443475 909 ntBASIC2.06□□□□□ -2.08
HLA-DPA1P20036 PRPS1P1-201ENST00000445305 876 ntBASIC2.06□□□□□ -2.08
HLA-DPA1P20036 AL031659.1-201ENST00000447075 539 ntBASIC2.06□□□□□ -2.08
HLA-DPA1P20036 SNRPGP7-201ENST00000469016 106 ntBASIC2.06□□□□□ -2.08
HLA-DPA1P20036 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DPA1P20036 RNU1-40P-201ENST00000516816 164 ntBASIC2.06□□□□□ -2.08
HLA-DPA1P20036 RNU1-97P-201ENST00000516872 164 ntBASIC2.06□□□□□ -2.08
HLA-DPA1P20036 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DPA1P20036 IGKV3-31-201ENST00000523109 329 ntBASIC2.06□□□□□ -2.08
HLA-DPA1P20036 MIR3913-1-201ENST00000577744 102 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms