Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM21P19474 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM21P19474 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
TRIM21P19474 SNORD56.1-201ENST00000362913 68 ntBASIC2.59□□□□□ -1.99
TRIM21P19474 RNU6-1072P-201ENST00000384703 107 ntBASIC2.59□□□□□ -1.99
TRIM21P19474 Y_RNA.573-201ENST00000384763 105 ntBASIC2.59□□□□□ -1.99
TRIM21P19474 RNU6-443P-201ENST00000384780 107 ntBASIC2.59□□□□□ -1.99
TRIM21P19474 RNU6-1245P-201ENST00000411130 106 ntBASIC2.59□□□□□ -1.99
TRIM21P19474 POLHP1-201ENST00000411806 470 ntBASIC2.59□□□□□ -1.99
TRIM21P19474 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.59□□□□□ -1.99
TRIM21P19474 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM21P19474 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM21P19474 Y_RNA.654-201ENST00000497848 106 ntBASIC2.59□□□□□ -1.99
TRIM21P19474 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM21P19474 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM21P19474 AK6P1-201ENST00000540219 478 ntBASIC2.59□□□□□ -1.99
TRIM21P19474 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM21P19474 AC027176.1-201ENST00000560204 514 ntBASIC2.59□□□□□ -1.99
TRIM21P19474 AC136619.2-201ENST00000563361 631 ntBASIC2.59□□□□□ -1.99
TRIM21P19474 TPRKBP2-201ENST00000565969 475 ntBASIC2.59□□□□□ -1.99
TRIM21P19474 MIR4513-201ENST00000581077 86 ntBASIC2.59□□□□□ -1.99
TRIM21P19474 MIR4672-201ENST00000583126 81 ntBASIC2.59□□□□□ -1.99
TRIM21P19474 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM21P19474 VN1R80P-201ENST00000597126 338 ntBASIC2.59□□□□□ -1.99
TRIM21P19474 APOOP1-201ENST00000604695 592 ntBASIC2.59□□□□□ -1.99
TRIM21P19474 AC024581.2-201ENST00000619986 252 ntBASIC2.59□□□□□ -1.99
TRIM21P19474 MIR1291-201ENST00000627649 87 ntBASIC2.59□□□□□ -1.99
TRIM21P19474 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
TRIM21P19474 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.58□□□□□ -2
TRIM21P19474 RNU1-52P-201ENST00000384190 164 ntBASIC2.58□□□□□ -2
TRIM21P19474 RNU6-622P-201ENST00000384272 103 ntBASIC2.58□□□□□ -2
TRIM21P19474 MIR518C-201ENST00000384822 101 ntBASIC2.58□□□□□ -2
TRIM21P19474 RNU6-1106P-201ENST00000390845 107 ntBASIC2.58□□□□□ -2
TRIM21P19474 RNU6-220P-201ENST00000390919 107 ntBASIC2.58□□□□□ -2
TRIM21P19474 RNU6-1068P-201ENST00000410958 103 ntBASIC2.58□□□□□ -2
TRIM21P19474 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.58□□□□□ -2
TRIM21P19474 SNORD56-201ENST00000413522 71 ntBASIC2.58□□□□□ -2
TRIM21P19474 MTCO1P20-201ENST00000425366 358 ntBASIC2.58□□□□□ -2
TRIM21P19474 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.58□□□□□ -2
TRIM21P19474 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.58□□□□□ -2
TRIM21P19474 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.58□□□□□ -2
TRIM21P19474 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.58□□□□□ -2
TRIM21P19474 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.58□□□□□ -2
TRIM21P19474 AC234781.5-201ENST00000508429 271 ntBASIC2.58□□□□□ -2
TRIM21P19474 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.58□□□□□ -2
TRIM21P19474 SMURF2P1-201ENST00000514992 481 ntBASIC2.58□□□□□ -2
TRIM21P19474 SNORA25.11-201ENST00000515935 105 ntBASIC2.58□□□□□ -2
TRIM21P19474 SNORA14.1-201ENST00000516113 141 ntBASIC2.58□□□□□ -2
TRIM21P19474 PRELID2P1-201ENST00000552837 301 ntBASIC2.58□□□□□ -2
TRIM21P19474 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.58□□□□□ -2
TRIM21P19474 AC090897.2-201ENST00000581715 130 ntBASIC2.58□□□□□ -2
TRIM21P19474 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.58□□□□□ -2
TRIM21P19474 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.58□□□□□ -2
TRIM21P19474 AC073410.2-201ENST00000603240 332 ntBASIC2.58□□□□□ -2
TRIM21P19474 AC092747.3-201ENST00000603769 301 ntBASIC2.58□□□□□ -2
TRIM21P19474 AC103705.1-201ENST00000619013 241 ntBASIC2.58□□□□□ -2
TRIM21P19474 AC007792.1-201ENST00000623023 402 ntBASIC2.58□□□□□ -2
TRIM21P19474 AC098679.4-201ENST00000624241 654 ntBASIC2.58□□□□□ -2
TRIM21P19474 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM21P19474 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.57□□□□□ -2
TRIM21P19474 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.57□□□□□ -2
TRIM21P19474 OR4G1P-203ENST00000641984 1631 ntBASIC2.57□□□□□ -2
TRIM21P19474 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
TRIM21P19474 RNY4P14-201ENST00000363656 96 ntBASIC2.57□□□□□ -2
TRIM21P19474 Y_RNA.231-201ENST00000364358 102 ntBASIC2.57□□□□□ -2
TRIM21P19474 RNU6-908P-201ENST00000410160 94 ntBASIC2.57□□□□□ -2
TRIM21P19474 RPS3AP44-201ENST00000425466 790 ntBASIC2.57□□□□□ -2
TRIM21P19474 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRIM21P19474 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.57□□□□□ -2
TRIM21P19474 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRIM21P19474 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.57□□□□□ -2
TRIM21P19474 COPS8P3-201ENST00000526024 482 ntBASIC2.57□□□□□ -2
TRIM21P19474 PSMA3P-201ENST00000555485 635 ntBASIC2.57□□□□□ -2
TRIM21P19474 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.57□□□□□ -2
TRIM21P19474 AC023824.2-201ENST00000566185 400 ntBASIC2.57□□□□□ -2
TRIM21P19474 MIR5571-201ENST00000577998 113 ntBASIC2.57□□□□□ -2
TRIM21P19474 MIR4658-201ENST00000584344 65 ntBASIC2.57□□□□□ -2
TRIM21P19474 MIR203B-201ENST00000636080 86 ntBASIC2.57□□□□□ -2
TRIM21P19474 AC002543.1-201ENST00000299783 1954 ntBASIC2.56□□□□□ -2
TRIM21P19474 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
TRIM21P19474 RNU4-12P-201ENST00000365233 139 ntBASIC2.56□□□□□ -2
TRIM21P19474 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
TRIM21P19474 RNU1-57P-201ENST00000384491 166 ntBASIC2.56□□□□□ -2
TRIM21P19474 RNU6-192P-201ENST00000391253 100 ntBASIC2.56□□□□□ -2
TRIM21P19474 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.56□□□□□ -2
TRIM21P19474 AF274854.1-201ENST00000413236 615 ntBASIC2.56□□□□□ -2
TRIM21P19474 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.56□□□□□ -2
TRIM21P19474 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.56□□□□□ -2
TRIM21P19474 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.56□□□□□ -2
TRIM21P19474 ERLEC1P1-201ENST00000433806 578 ntBASIC2.56□□□□□ -2
TRIM21P19474 SNORA59A-201ENST00000459326 152 ntBASIC2.56□□□□□ -2
TRIM21P19474 RNU7-138P-201ENST00000459479 64 ntBASIC2.56□□□□□ -2
TRIM21P19474 AC117503.1-201ENST00000472241 394 ntBASIC2.56□□□□□ -2
TRIM21P19474 AP001025.1-201ENST00000486139 332 ntBASIC2.56□□□□□ -2
TRIM21P19474 RN7SL636P-201ENST00000497504 294 ntBASIC2.56□□□□□ -2
TRIM21P19474 AC026436.1-201ENST00000510537 270 ntBASIC2.56□□□□□ -2
TRIM21P19474 RNU6-1038P-201ENST00000516516 104 ntBASIC2.56□□□□□ -2
TRIM21P19474 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.56□□□□□ -2
TRIM21P19474 AC078814.3-201ENST00000553036 491 ntBASIC2.56□□□□□ -2
TRIM21P19474 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms