Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 MIR518F-201ENST00000384973 87 ntBASIC5.62□□□□□ -1.51
CD44P16070 MIR600-201ENST00000385007 98 ntBASIC5.62□□□□□ -1.51
CD44P16070 U8.15-201ENST00000390947 134 ntBASIC5.62□□□□□ -1.51
CD44P16070 AL133270.1-201ENST00000402635 279 ntBASIC5.62□□□□□ -1.51
CD44P16070 AL590399.4-201ENST00000436561 601 ntBASIC5.62□□□□□ -1.51
CD44P16070 RN7SL441P-201ENST00000492388 296 ntBASIC5.62□□□□□ -1.51
CD44P16070 AC108145.1-201ENST00000503770 153 ntBASIC5.62□□□□□ -1.51
CD44P16070 ACA59.2-201ENST00000517061 156 ntBASIC5.62□□□□□ -1.51
CD44P16070 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC5.62□□□□□ -1.51
CD44P16070 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.62□□□□□ -1.51
CD44P16070 AC064859.1-201ENST00000624741 174 ntBASIC5.62□□□□□ -1.51
CD44P16070 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD44P16070 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD44P16070 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD44P16070 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.62□□□□□ -1.51
CD44P16070 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CD44P16070 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CD44P16070 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CD44P16070 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD44P16070 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.61□□□□□ -1.51
CD44P16070 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD44P16070 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
CD44P16070 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CD44P16070 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD44P16070 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD44P16070 RNU1-108P-201ENST00000362556 161 ntBASIC5.61□□□□□ -1.51
CD44P16070 RNU6-457P-201ENST00000363999 107 ntBASIC5.61□□□□□ -1.51
CD44P16070 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD44P16070 RNU2-49P-201ENST00000410666 184 ntBASIC5.61□□□□□ -1.51
CD44P16070 RPS26P47-201ENST00000427219 348 ntBASIC5.61□□□□□ -1.51
CD44P16070 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD44P16070 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
CD44P16070 SNRPGP13-201ENST00000442212 177 ntBASIC5.61□□□□□ -1.51
CD44P16070 AL691482.1-201ENST00000453255 87 ntBASIC5.61□□□□□ -1.51
CD44P16070 SNORA31.20-201ENST00000517111 133 ntBASIC5.61□□□□□ -1.51
CD44P16070 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC5.61□□□□□ -1.51
CD44P16070 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.61□□□□□ -1.51
CD44P16070 AC011604.1-201ENST00000545978 196 ntBASIC5.61□□□□□ -1.51
CD44P16070 AC022217.4-201ENST00000604389 163 ntBASIC5.61□□□□□ -1.51
CD44P16070 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CD44P16070 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.61□□□□□ -1.51
CD44P16070 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD44P16070 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
CD44P16070 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.61□□□□□ -1.51
CD44P16070 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CD44P16070 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CD44P16070 RNU1-43P-201ENST00000365052 165 ntBASIC5.6□□□□□ -1.51
CD44P16070 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CD44P16070 RNU6-629P-201ENST00000384061 103 ntBASIC5.6□□□□□ -1.51
CD44P16070 RNU6-524P-201ENST00000384270 107 ntBASIC5.6□□□□□ -1.51
CD44P16070 MIR153-1-201ENST00000384914 90 ntBASIC5.6□□□□□ -1.51
CD44P16070 RNU6-679P-201ENST00000391003 106 ntBASIC5.6□□□□□ -1.51
CD44P16070 SNORA77-201ENST00000408716 125 ntBASIC5.6□□□□□ -1.51
CD44P16070 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.6□□□□□ -1.51
CD44P16070 RN7SL443P-201ENST00000464331 290 ntBASIC5.6□□□□□ -1.51
CD44P16070 AC008155.2-201ENST00000464337 397 ntBASIC5.6□□□□□ -1.51
CD44P16070 AC073073.1-201ENST00000493920 463 ntBASIC5.6□□□□□ -1.51
CD44P16070 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.6□□□□□ -1.51
CD44P16070 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.6□□□□□ -1.51
CD44P16070 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CD44P16070 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.6□□□□□ -1.51
CD44P16070 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CD44P16070 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CD44P16070 AC004925.1-201ENST00000624256 2706 ntBASIC5.6□□□□□ -1.51
CD44P16070 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD44P16070 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD44P16070 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CD44P16070 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CD44P16070 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
CD44P16070 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.59□□□□□ -1.51
CD44P16070 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD44P16070 RNU6-315P-201ENST00000362666 107 ntBASIC5.59□□□□□ -1.51
CD44P16070 RNU6-884P-201ENST00000363889 107 ntBASIC5.59□□□□□ -1.51
CD44P16070 RNU6-1201P-201ENST00000384227 107 ntBASIC5.59□□□□□ -1.51
CD44P16070 RPL12P11-201ENST00000439970 501 ntBASIC5.59□□□□□ -1.51
CD44P16070 RNU7-70P-201ENST00000516941 66 ntBASIC5.59□□□□□ -1.51
CD44P16070 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC5.59□□□□□ -1.51
CD44P16070 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CD44P16070 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.59□□□□□ -1.51
CD44P16070 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CD44P16070 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD44P16070 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD44P16070 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD44P16070 AC107027.3-201ENST00000565095 3473 ntBASIC5.59□□□□□ -1.51
CD44P16070 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CD44P16070 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
CD44P16070 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CD44P16070 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
CD44P16070 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CD44P16070 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CD44P16070 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CD44P16070 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.58□□□□□ -1.52
CD44P16070 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CD44P16070 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.58□□□□□ -1.52
CD44P16070 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CD44P16070 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CD44P16070 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CD44P16070 Y_RNA.40-201ENST00000362645 93 ntBASIC5.58□□□□□ -1.52
CD44P16070 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.58□□□□□ -1.52
CD44P16070 RNU7-57P-201ENST00000459540 60 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms