Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNA5SP44-201ENST00000410446 133 ntBASIC3.65□□□□□ -1.83
COL6A2P12110 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.65□□□□□ -1.83
COL6A2P12110 AC139712.2-201ENST00000424302 339 ntBASIC3.65□□□□□ -1.83
COL6A2P12110 SDAD1P3-201ENST00000427380 333 ntBASIC3.65□□□□□ -1.83
COL6A2P12110 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.65□□□□□ -1.83
COL6A2P12110 Z82188.1-201ENST00000436709 154 ntBASIC3.65□□□□□ -1.83
COL6A2P12110 AC009296.1-201ENST00000443146 155 ntBASIC3.65□□□□□ -1.83
COL6A2P12110 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.65□□□□□ -1.83
COL6A2P12110 AC010469.2-201ENST00000496412 480 ntBASIC3.65□□□□□ -1.83
COL6A2P12110 RNU6-579P-201ENST00000516879 102 ntBASIC3.65□□□□□ -1.83
COL6A2P12110 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.65□□□□□ -1.83
COL6A2P12110 AP003733.2-201ENST00000529409 171 ntBASIC3.65□□□□□ -1.83
COL6A2P12110 HSPE1P20-201ENST00000538133 289 ntBASIC3.65□□□□□ -1.83
COL6A2P12110 CYCSP30-201ENST00000546447 172 ntBASIC3.65□□□□□ -1.83
COL6A2P12110 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.65□□□□□ -1.83
COL6A2P12110 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.65□□□□□ -1.83
COL6A2P12110 AC005357.1-201ENST00000588399 301 ntBASIC3.65□□□□□ -1.83
COL6A2P12110 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.65□□□□□ -1.83
COL6A2P12110 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
COL6A2P12110 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.65□□□□□ -1.83
COL6A2P12110 HAUS6P2-201ENST00000433254 2404 ntBASIC3.65□□□□□ -1.83
COL6A2P12110 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL6A2P12110 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL6A2P12110 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL6A2P12110 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL6A2P12110 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
COL6A2P12110 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL6A2P12110 SNORD56.1-201ENST00000362913 68 ntBASIC3.64□□□□□ -1.83
COL6A2P12110 Y_RNA.257-201ENST00000364596 102 ntBASIC3.64□□□□□ -1.83
COL6A2P12110 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL6A2P12110 BX679664.1-201ENST00000434429 253 ntBASIC3.64□□□□□ -1.83
COL6A2P12110 AL353705.4-201ENST00000449661 238 ntBASIC3.64□□□□□ -1.83
COL6A2P12110 RNU7-87P-201ENST00000459343 62 ntBASIC3.64□□□□□ -1.83
COL6A2P12110 RPS29P20-201ENST00000489592 171 ntBASIC3.64□□□□□ -1.83
COL6A2P12110 RNU6-388P-201ENST00000517012 105 ntBASIC3.64□□□□□ -1.83
COL6A2P12110 RNU6-389P-201ENST00000517048 105 ntBASIC3.64□□□□□ -1.83
COL6A2P12110 SNORA31.23-201ENST00000517219 133 ntBASIC3.64□□□□□ -1.83
COL6A2P12110 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.64□□□□□ -1.83
COL6A2P12110 AC034105.4-201ENST00000568304 277 ntBASIC3.64□□□□□ -1.83
COL6A2P12110 AC009163.5-201ENST00000575421 637 ntBASIC3.64□□□□□ -1.83
COL6A2P12110 MIR4474-201ENST00000579189 78 ntBASIC3.64□□□□□ -1.83
COL6A2P12110 AL355877.2-201ENST00000603670 358 ntBASIC3.64□□□□□ -1.83
COL6A2P12110 HSPE1P7-201ENST00000604681 321 ntBASIC3.64□□□□□ -1.83
COL6A2P12110 AC019159.1-201ENST00000605094 187 ntBASIC3.64□□□□□ -1.83
COL6A2P12110 AL442067.1-201ENST00000613261 223 ntBASIC3.64□□□□□ -1.83
COL6A2P12110 MIR6076-201ENST00000617521 113 ntBASIC3.64□□□□□ -1.83
COL6A2P12110 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.64□□□□□ -1.83
COL6A2P12110 AP000553.6-201ENST00000641242 118 ntBASIC3.64□□□□□ -1.83
COL6A2P12110 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.64□□□□□ -1.83
COL6A2P12110 AL353743.1-202ENST00000431724 1695 ntBASIC3.64□□□□□ -1.83
COL6A2P12110 AC058791.1-201ENST00000608412 3198 ntBASIC3.64□□□□□ -1.83
COL6A2P12110 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL6A2P12110 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL6A2P12110 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.63□□□□□ -1.83
COL6A2P12110 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL6A2P12110 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
COL6A2P12110 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL6A2P12110 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL6A2P12110 RNU6-142P-201ENST00000384019 107 ntBASIC3.63□□□□□ -1.83
COL6A2P12110 RNU6-843P-201ENST00000384454 104 ntBASIC3.63□□□□□ -1.83
COL6A2P12110 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.63□□□□□ -1.83
COL6A2P12110 RNU6-121P-201ENST00000410525 99 ntBASIC3.63□□□□□ -1.83
COL6A2P12110 RN7SKP58-201ENST00000411010 305 ntBASIC3.63□□□□□ -1.83
COL6A2P12110 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.63□□□□□ -1.83
COL6A2P12110 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.63□□□□□ -1.83
COL6A2P12110 AL117339.2-201ENST00000430475 180 ntBASIC3.63□□□□□ -1.83
COL6A2P12110 AL590664.1-201ENST00000448065 339 ntBASIC3.63□□□□□ -1.83
COL6A2P12110 SSXP4-201ENST00000451349 245 ntBASIC3.63□□□□□ -1.83
COL6A2P12110 SNORA84-201ENST00000459229 133 ntBASIC3.63□□□□□ -1.83
COL6A2P12110 RPL32P34-201ENST00000486380 400 ntBASIC3.63□□□□□ -1.83
COL6A2P12110 SCARNA14-201ENST00000516903 136 ntBASIC3.63□□□□□ -1.83
COL6A2P12110 CKS1BP7-201ENST00000522230 235 ntBASIC3.63□□□□□ -1.83
COL6A2P12110 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.63□□□□□ -1.83
COL6A2P12110 MIR4425-201ENST00000580572 84 ntBASIC3.63□□□□□ -1.83
COL6A2P12110 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
COL6A2P12110 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.63□□□□□ -1.83
COL6A2P12110 U6.92-201ENST00000636464 89 ntBASIC3.63□□□□□ -1.83
COL6A2P12110 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
COL6A2P12110 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.63□□□□□ -1.83
COL6A2P12110 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL6A2P12110 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
COL6A2P12110 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL6A2P12110 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.62□□□□□ -1.83
COL6A2P12110 Y_RNA.14-201ENST00000362415 103 ntBASIC3.62□□□□□ -1.83
COL6A2P12110 RNU5B-2P-201ENST00000363036 113 ntBASIC3.62□□□□□ -1.83
COL6A2P12110 Y_RNA.105-201ENST00000363182 111 ntBASIC3.62□□□□□ -1.83
COL6A2P12110 RNU6-1141P-201ENST00000364520 107 ntBASIC3.62□□□□□ -1.83
COL6A2P12110 RNU6-487P-201ENST00000365430 104 ntBASIC3.62□□□□□ -1.83
COL6A2P12110 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
COL6A2P12110 AC009310.1-201ENST00000414414 451 ntBASIC3.62□□□□□ -1.83
COL6A2P12110 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.62□□□□□ -1.83
COL6A2P12110 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.62□□□□□ -1.83
COL6A2P12110 U8.22-201ENST00000459141 133 ntBASIC3.62□□□□□ -1.83
COL6A2P12110 TOMM22P6-201ENST00000465035 409 ntBASIC3.62□□□□□ -1.83
COL6A2P12110 RN7SL323P-201ENST00000494712 295 ntBASIC3.62□□□□□ -1.83
COL6A2P12110 AC091874.1-201ENST00000511402 339 ntBASIC3.62□□□□□ -1.83
COL6A2P12110 AC008011.1-201ENST00000545989 227 ntBASIC3.62□□□□□ -1.83
COL6A2P12110 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.62□□□□□ -1.83
COL6A2P12110 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
COL6A2P12110 MIR5571-201ENST00000577998 113 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms