Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CHGAP10645 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CHGAP10645 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
CHGAP10645 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC6.09□□□□□ -1.43
CHGAP10645 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHGAP10645 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CHGAP10645 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHGAP10645 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHGAP10645 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHGAP10645 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
CHGAP10645 RNU6-1279P-201ENST00000383917 103 ntBASIC6.08□□□□□ -1.44
CHGAP10645 MIR200C-201ENST00000384980 68 ntBASIC6.08□□□□□ -1.44
CHGAP10645 PTMAP5-201ENST00000393073 333 ntBASIC6.08□□□□□ -1.44
CHGAP10645 EI24P2-201ENST00000397776 1076 ntBASIC6.08□□□□□ -1.44
CHGAP10645 RNA5SP129-201ENST00000410276 118 ntBASIC6.08□□□□□ -1.44
CHGAP10645 HSPE1P12-201ENST00000412576 301 ntBASIC6.08□□□□□ -1.44
CHGAP10645 RPL23AP83-201ENST00000434984 473 ntBASIC6.08□□□□□ -1.44
CHGAP10645 RPS29P20-201ENST00000489592 171 ntBASIC6.08□□□□□ -1.44
CHGAP10645 RNU7-121P-201ENST00000516604 62 ntBASIC6.08□□□□□ -1.44
CHGAP10645 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC6.08□□□□□ -1.44
CHGAP10645 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC6.08□□□□□ -1.44
CHGAP10645 MIR548X2-201ENST00000579776 100 ntBASIC6.08□□□□□ -1.44
CHGAP10645 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC6.08□□□□□ -1.44
CHGAP10645 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CHGAP10645 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHGAP10645 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHGAP10645 RNU6-727P-201ENST00000363592 107 ntBASIC6.07□□□□□ -1.44
CHGAP10645 MIR1911-201ENST00000410783 80 ntBASIC6.07□□□□□ -1.44
CHGAP10645 RPL23AP46-201ENST00000438548 490 ntBASIC6.07□□□□□ -1.44
CHGAP10645 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC6.07□□□□□ -1.44
CHGAP10645 RNU6-436P-201ENST00000516171 114 ntBASIC6.07□□□□□ -1.44
CHGAP10645 RNU2-12P-201ENST00000517216 168 ntBASIC6.07□□□□□ -1.44
CHGAP10645 AC011602.1-201ENST00000546484 331 ntBASIC6.07□□□□□ -1.44
CHGAP10645 AC006199.1-201ENST00000548728 219 ntBASIC6.07□□□□□ -1.44
CHGAP10645 SNORD98-201ENST00000636377 67 ntBASIC6.07□□□□□ -1.44
CHGAP10645 AC016588.2-201ENST00000632484 3021 ntBASIC6.07□□□□□ -1.44
CHGAP10645 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CHGAP10645 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CHGAP10645 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CHGAP10645 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CHGAP10645 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CHGAP10645 AC100821.1-201ENST00000523153 2479 ntBASIC6.06□□□□□ -1.44
CHGAP10645 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
CHGAP10645 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC6.06□□□□□ -1.44
CHGAP10645 RNU6-1264P-201ENST00000383891 107 ntBASIC6.06□□□□□ -1.44
CHGAP10645 MIR195-201ENST00000385194 87 ntBASIC6.06□□□□□ -1.44
CHGAP10645 MIR549A-201ENST00000385268 96 ntBASIC6.06□□□□□ -1.44
CHGAP10645 RNU6-763P-201ENST00000390865 106 ntBASIC6.06□□□□□ -1.44
CHGAP10645 RNU6-381P-201ENST00000391259 108 ntBASIC6.06□□□□□ -1.44
CHGAP10645 MIR208B-201ENST00000401172 77 ntBASIC6.06□□□□□ -1.44
CHGAP10645 U3.40-201ENST00000408706 208 ntBASIC6.06□□□□□ -1.44
CHGAP10645 SNORA74C-2-201ENST00000411179 201 ntBASIC6.06□□□□□ -1.44
CHGAP10645 CYCSP48-201ENST00000417124 323 ntBASIC6.06□□□□□ -1.44
CHGAP10645 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CHGAP10645 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC6.06□□□□□ -1.44
CHGAP10645 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC6.06□□□□□ -1.44
CHGAP10645 RN7SKP164-201ENST00000516138 266 ntBASIC6.06□□□□□ -1.44
CHGAP10645 AL162713.1-201ENST00000604480 262 ntBASIC6.06□□□□□ -1.44
CHGAP10645 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CHGAP10645 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC6.06□□□□□ -1.44
CHGAP10645 Z82217.1-201ENST00000625157 8149 ntBASIC6.06□□□□□ -1.44
CHGAP10645 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC6.06□□□□□ -1.44
CHGAP10645 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHGAP10645 AC010332.2-201ENST00000613083 1904 ntBASIC6.05□□□□□ -1.44
CHGAP10645 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CHGAP10645 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC6.05□□□□□ -1.44
CHGAP10645 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHGAP10645 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
CHGAP10645 SNORD46.1-201ENST00000364139 104 ntBASIC6.05□□□□□ -1.44
CHGAP10645 SNORA40-201ENST00000388090 126 ntBASIC6.05□□□□□ -1.44
CHGAP10645 AL591419.1-201ENST00000427423 339 ntBASIC6.05□□□□□ -1.44
CHGAP10645 AL500522.2-201ENST00000448562 343 ntBASIC6.05□□□□□ -1.44
CHGAP10645 AC006517.1-201ENST00000480485 328 ntBASIC6.05□□□□□ -1.44
CHGAP10645 AIG1P1-201ENST00000503376 148 ntBASIC6.05□□□□□ -1.44
CHGAP10645 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC6.05□□□□□ -1.44
CHGAP10645 POC1B-211ENST00000549504 581 ntTSL 5 BASIC6.05□□□□□ -1.44
CHGAP10645 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC6.05□□□□□ -1.44
CHGAP10645 MIR4431-201ENST00000579990 94 ntBASIC6.05□□□□□ -1.44
CHGAP10645 AC005255.1-201ENST00000593748 216 ntBASIC6.05□□□□□ -1.44
CHGAP10645 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC6.05□□□□□ -1.44
CHGAP10645 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHGAP10645 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC6.05□□□□□ -1.44
CHGAP10645 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHGAP10645 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CHGAP10645 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHGAP10645 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC6.04□□□□□ -1.44
CHGAP10645 RNA5SP124-201ENST00000362739 110 ntBASIC6.04□□□□□ -1.44
CHGAP10645 ACEA_U3.1-201ENST00000363057 217 ntBASIC6.04□□□□□ -1.44
CHGAP10645 RNU6-103P-201ENST00000363686 107 ntBASIC6.04□□□□□ -1.44
CHGAP10645 RNU6-324P-201ENST00000363957 106 ntBASIC6.04□□□□□ -1.44
CHGAP10645 SNORD66.1-201ENST00000391230 76 ntBASIC6.04□□□□□ -1.44
CHGAP10645 RPS4XP13-201ENST00000483219 789 ntBASIC6.04□□□□□ -1.44
CHGAP10645 RNU6-928P-201ENST00000516876 104 ntBASIC6.04□□□□□ -1.44
CHGAP10645 FTH1P11-201ENST00000517577 551 ntBASIC6.04□□□□□ -1.44
CHGAP10645 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC6.04□□□□□ -1.44
CHGAP10645 AC006064.5-201ENST00000541782 248 ntBASIC6.04□□□□□ -1.44
CHGAP10645 MIR3923-201ENST00000579521 83 ntBASIC6.04□□□□□ -1.44
CHGAP10645 AC012442.3-202ENST00000636742 206 ntBASIC6.04□□□□□ -1.44
CHGAP10645 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CHGAP10645 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms