Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 HMGB1P35-201ENST00000503360 598 ntBASIC2.36□□□□□ -2.03
APOA4P06727 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.36□□□□□ -2.03
APOA4P06727 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.36□□□□□ -2.03
APOA4P06727 RNU5F-2P-201ENST00000516066 82 ntBASIC2.36□□□□□ -2.03
APOA4P06727 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.36□□□□□ -2.03
APOA4P06727 AC069113.1-201ENST00000517763 267 ntBASIC2.36□□□□□ -2.03
APOA4P06727 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.36□□□□□ -2.03
APOA4P06727 AC021269.2-201ENST00000532318 330 ntBASIC2.36□□□□□ -2.03
APOA4P06727 MIR5694-201ENST00000581190 76 ntBASIC2.36□□□□□ -2.03
APOA4P06727 AC004223.2-201ENST00000590309 544 ntBASIC2.36□□□□□ -2.03
APOA4P06727 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.36□□□□□ -2.03
APOA4P06727 AC012507.3-201ENST00000603556 477 ntBASIC2.36□□□□□ -2.03
APOA4P06727 U2.17-201ENST00000611454 95 ntBASIC2.36□□□□□ -2.03
APOA4P06727 AL354950.2-201ENST00000617939 290 ntBASIC2.36□□□□□ -2.03
APOA4P06727 RNU6-1159P-201ENST00000362933 107 ntBASIC2.35□□□□□ -2.03
APOA4P06727 RNU1-51P-201ENST00000365345 176 ntBASIC2.35□□□□□ -2.03
APOA4P06727 RPS29P13-201ENST00000402041 169 ntBASIC2.35□□□□□ -2.03
APOA4P06727 HMGB3P2-201ENST00000411913 584 ntBASIC2.35□□□□□ -2.03
APOA4P06727 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.35□□□□□ -2.03
APOA4P06727 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.35□□□□□ -2.03
APOA4P06727 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.35□□□□□ -2.03
APOA4P06727 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.35□□□□□ -2.03
APOA4P06727 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
APOA4P06727 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.35□□□□□ -2.03
APOA4P06727 AP005136.1-201ENST00000579765 429 ntBASIC2.35□□□□□ -2.03
APOA4P06727 MIR3611-201ENST00000584484 83 ntBASIC2.35□□□□□ -2.03
APOA4P06727 AC004908.3-201ENST00000610248 625 ntBASIC2.35□□□□□ -2.03
APOA4P06727 MIR6840-201ENST00000611937 71 ntBASIC2.35□□□□□ -2.03
APOA4P06727 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.35□□□□□ -2.03
APOA4P06727 YWHAEP7-203ENST00000622054 312 ntBASIC2.35□□□□□ -2.03
APOA4P06727 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.35□□□□□ -2.03
APOA4P06727 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
APOA4P06727 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.35□□□□□ -2.03
APOA4P06727 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.35□□□□□ -2.03
APOA4P06727 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
APOA4P06727 AC069528.2-201ENST00000624849 1991 ntBASIC2.34□□□□□ -2.03
APOA4P06727 U3.12-201ENST00000364498 214 ntBASIC2.34□□□□□ -2.03
APOA4P06727 Y_RNA.255-201ENST00000364581 97 ntBASIC2.34□□□□□ -2.03
APOA4P06727 RNU6-692P-201ENST00000384496 107 ntBASIC2.34□□□□□ -2.03
APOA4P06727 MIR518A2-201ENST00000384966 87 ntBASIC2.34□□□□□ -2.03
APOA4P06727 RNU4-55P-201ENST00000410731 137 ntBASIC2.34□□□□□ -2.03
APOA4P06727 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.34□□□□□ -2.03
APOA4P06727 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.34□□□□□ -2.03
APOA4P06727 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.34□□□□□ -2.03
APOA4P06727 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.34□□□□□ -2.03
APOA4P06727 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.34□□□□□ -2.03
APOA4P06727 AC234781.5-201ENST00000508429 271 ntBASIC2.34□□□□□ -2.03
APOA4P06727 AC026436.1-201ENST00000510537 270 ntBASIC2.34□□□□□ -2.03
APOA4P06727 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.34□□□□□ -2.03
APOA4P06727 AC078814.3-201ENST00000553036 491 ntBASIC2.34□□□□□ -2.03
APOA4P06727 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.34□□□□□ -2.03
APOA4P06727 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.34□□□□□ -2.03
APOA4P06727 AC107304.1-201ENST00000604229 296 ntBASIC2.34□□□□□ -2.03
APOA4P06727 AC018889.1-201ENST00000605372 397 ntBASIC2.34□□□□□ -2.03
APOA4P06727 AC245008.1-201ENST00000608123 476 ntBASIC2.34□□□□□ -2.03
APOA4P06727 AC104073.3-201ENST00000610942 955 ntBASIC2.34□□□□□ -2.03
APOA4P06727 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.34□□□□□ -2.03
APOA4P06727 uc_338.34-201ENST00000617467 174 ntBASIC2.34□□□□□ -2.03
APOA4P06727 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.34□□□□□ -2.03
APOA4P06727 AC241585.2-209ENST00000638217 143 ntBASIC2.34□□□□□ -2.03
APOA4P06727 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.34□□□□□ -2.04
APOA4P06727 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.04
APOA4P06727 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
APOA4P06727 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.33□□□□□ -2.04
APOA4P06727 RNU6-43P-201ENST00000384302 107 ntBASIC2.33□□□□□ -2.04
APOA4P06727 SNORA80E-201ENST00000384744 137 ntBASIC2.33□□□□□ -2.04
APOA4P06727 MIR17-201ENST00000385012 84 ntBASIC2.33□□□□□ -2.04
APOA4P06727 Y_RNA.597-201ENST00000410463 100 ntBASIC2.33□□□□□ -2.04
APOA4P06727 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.33□□□□□ -2.04
APOA4P06727 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.33□□□□□ -2.04
APOA4P06727 AL590556.1-201ENST00000423231 483 ntBASIC2.33□□□□□ -2.04
APOA4P06727 CBX3P6-201ENST00000430257 527 ntBASIC2.33□□□□□ -2.04
APOA4P06727 VN1R108P-201ENST00000431580 830 ntBASIC2.33□□□□□ -2.04
APOA4P06727 IFNA20P-201ENST00000436840 528 ntBASIC2.33□□□□□ -2.04
APOA4P06727 RPL32P28-201ENST00000443577 397 ntBASIC2.33□□□□□ -2.04
APOA4P06727 AL031274.1-201ENST00000450334 232 ntBASIC2.33□□□□□ -2.04
APOA4P06727 MTCO2P18-201ENST00000457151 658 ntBASIC2.33□□□□□ -2.04
APOA4P06727 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.33□□□□□ -2.04
APOA4P06727 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.33□□□□□ -2.04
APOA4P06727 RN7SL636P-201ENST00000497504 294 ntBASIC2.33□□□□□ -2.04
APOA4P06727 AC022447.4-201ENST00000504053 364 ntBASIC2.33□□□□□ -2.04
APOA4P06727 MTND4P7-201ENST00000523876 130 ntBASIC2.33□□□□□ -2.04
APOA4P06727 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.33□□□□□ -2.04
APOA4P06727 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.33□□□□□ -2.04
APOA4P06727 AP003034.1-201ENST00000534621 422 ntBASIC2.33□□□□□ -2.04
APOA4P06727 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.33□□□□□ -2.04
APOA4P06727 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.33□□□□□ -2.04
APOA4P06727 AC103987.3-201ENST00000582071 292 ntBASIC2.33□□□□□ -2.04
APOA4P06727 AC103810.6-201ENST00000606708 136 ntBASIC2.33□□□□□ -2.04
APOA4P06727 AC017083.3-201ENST00000609955 700 ntBASIC2.33□□□□□ -2.04
APOA4P06727 AC063943.3-201ENST00000615562 356 ntBASIC2.33□□□□□ -2.04
APOA4P06727 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
APOA4P06727 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
APOA4P06727 RNU6-1141P-201ENST00000364520 107 ntBASIC2.32□□□□□ -2.04
APOA4P06727 USP9YP27-201ENST00000418455 438 ntBASIC2.32□□□□□ -2.04
APOA4P06727 AL606489.2-201ENST00000433886 234 ntBASIC2.32□□□□□ -2.04
APOA4P06727 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.32□□□□□ -2.04
APOA4P06727 PSPHP1-201ENST00000450062 261 ntBASIC2.32□□□□□ -2.04
APOA4P06727 PRELID3BP1-201ENST00000457142 540 ntBASIC2.32□□□□□ -2.04
APOA4P06727 SNORA40.12-201ENST00000516329 111 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms