Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.01□□□□□ -2.25
HLA-DQB2P05538 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.01□□□□□ -2.25
HLA-DQB2P05538 AC104982.1-201ENST00000478775 574 ntBASIC1.01□□□□□ -2.25
HLA-DQB2P05538 AC132942.1-201ENST00000486753 483 ntBASIC1.01□□□□□ -2.25
HLA-DQB2P05538 ARL2BPP4-201ENST00000506854 471 ntBASIC1.01□□□□□ -2.25
HLA-DQB2P05538 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.01□□□□□ -2.25
HLA-DQB2P05538 RNU6-1053P-201ENST00000515930 101 ntBASIC1.01□□□□□ -2.25
HLA-DQB2P05538 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.01□□□□□ -2.25
HLA-DQB2P05538 AC005668.1-201ENST00000571142 476 ntBASIC1.01□□□□□ -2.25
HLA-DQB2P05538 AC005786.1-201ENST00000588553 154 ntBASIC1.01□□□□□ -2.25
HLA-DQB2P05538 AC123912.5-201ENST00000605470 343 ntBASIC1.01□□□□□ -2.25
HLA-DQB2P05538 AC080013.3-201ENST00000606839 578 ntBASIC1.01□□□□□ -2.25
HLA-DQB2P05538 AL138955.1-201ENST00000622881 1040 ntBASIC1.01□□□□□ -2.25
HLA-DQB2P05538 AC130454.1-201ENST00000622948 401 ntBASIC1.01□□□□□ -2.25
HLA-DQB2P05538 AC007792.1-201ENST00000623023 402 ntBASIC1.01□□□□□ -2.25
HLA-DQB2P05538 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
HLA-DQB2P05538 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.01□□□□□ -2.25
HLA-DQB2P05538 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
HLA-DQB2P05538 RNY4P24-201ENST00000362735 96 ntBASIC1□□□□□ -2.25
HLA-DQB2P05538 RNU5E-10P-201ENST00000363506 118 ntBASIC1□□□□□ -2.25
HLA-DQB2P05538 RNU6-296P-201ENST00000384608 107 ntBASIC1□□□□□ -2.25
HLA-DQB2P05538 RNU4-22P-201ENST00000411058 166 ntBASIC1□□□□□ -2.25
HLA-DQB2P05538 RPL21P90-201ENST00000415692 466 ntBASIC1□□□□□ -2.25
HLA-DQB2P05538 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1□□□□□ -2.25
HLA-DQB2P05538 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1□□□□□ -2.25
HLA-DQB2P05538 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1□□□□□ -2.25
HLA-DQB2P05538 RPL23AP30-201ENST00000432419 501 ntBASIC1□□□□□ -2.25
HLA-DQB2P05538 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1□□□□□ -2.25
HLA-DQB2P05538 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1□□□□□ -2.25
HLA-DQB2P05538 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1□□□□□ -2.25
HLA-DQB2P05538 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1□□□□□ -2.25
HLA-DQB2P05538 RNU6-333P-201ENST00000459117 107 ntBASIC1□□□□□ -2.25
HLA-DQB2P05538 RPS26P55-201ENST00000471178 356 ntBASIC1□□□□□ -2.25
HLA-DQB2P05538 HMGN1P7-201ENST00000491722 313 ntBASIC1□□□□□ -2.25
HLA-DQB2P05538 RNU6-467P-201ENST00000517027 110 ntBASIC1□□□□□ -2.25
HLA-DQB2P05538 AC123904.2-201ENST00000548059 300 ntBASIC1□□□□□ -2.25
HLA-DQB2P05538 BNIP3P6-201ENST00000549284 499 ntBASIC1□□□□□ -2.25
HLA-DQB2P05538 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1□□□□□ -2.25
HLA-DQB2P05538 MIR4307-201ENST00000582802 84 ntBASIC1□□□□□ -2.25
HLA-DQB2P05538 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1□□□□□ -2.25
HLA-DQB2P05538 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1□□□□□ -2.25
HLA-DQB2P05538 AC068205.3-201ENST00000636385 468 ntBASIC1□□□□□ -2.25
HLA-DQB2P05538 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
HLA-DQB2P05538 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
HLA-DQB2P05538 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
HLA-DQB2P05538 RNU6-384P-201ENST00000364900 104 ntBASIC0.99□□□□□ -2.25
HLA-DQB2P05538 AP000275.1-201ENST00000411943 390 ntBASIC0.99□□□□□ -2.25
HLA-DQB2P05538 BTF3L4P1-201ENST00000413813 468 ntBASIC0.99□□□□□ -2.25
HLA-DQB2P05538 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.99□□□□□ -2.25
HLA-DQB2P05538 AL031779.1-201ENST00000415663 330 ntBASIC0.99□□□□□ -2.25
HLA-DQB2P05538 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.99□□□□□ -2.25
HLA-DQB2P05538 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.99□□□□□ -2.25
HLA-DQB2P05538 TOMM22P2-201ENST00000430735 237 ntBASIC0.99□□□□□ -2.25
HLA-DQB2P05538 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.99□□□□□ -2.25
HLA-DQB2P05538 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.99□□□□□ -2.25
HLA-DQB2P05538 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.99□□□□□ -2.25
HLA-DQB2P05538 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.99□□□□□ -2.25
HLA-DQB2P05538 AC079448.1-201ENST00000449377 373 ntBASIC0.99□□□□□ -2.25
HLA-DQB2P05538 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.99□□□□□ -2.25
HLA-DQB2P05538 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.99□□□□□ -2.25
HLA-DQB2P05538 AC130509.1-201ENST00000464158 433 ntBASIC0.99□□□□□ -2.25
HLA-DQB2P05538 RNU2-10P-201ENST00000516375 211 ntBASIC0.99□□□□□ -2.25
HLA-DQB2P05538 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.99□□□□□ -2.25
HLA-DQB2P05538 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.99□□□□□ -2.25
HLA-DQB2P05538 AC107934.1-201ENST00000522215 217 ntBASIC0.99□□□□□ -2.25
HLA-DQB2P05538 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.99□□□□□ -2.25
HLA-DQB2P05538 AC091135.1-201ENST00000585943 307 ntBASIC0.99□□□□□ -2.25
HLA-DQB2P05538 AL136363.2-201ENST00000604173 851 ntBASIC0.99□□□□□ -2.25
HLA-DQB2P05538 BNIP3P10-201ENST00000605360 577 ntBASIC0.99□□□□□ -2.25
HLA-DQB2P05538 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.99□□□□□ -2.25
HLA-DQB2P05538 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.99□□□□□ -2.25
HLA-DQB2P05538 AL133216.2-202ENST00000634512 349 ntBASIC0.99□□□□□ -2.25
HLA-DQB2P05538 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.99□□□□□ -2.25
HLA-DQB2P05538 MTND5P9-201ENST00000503854 1755 ntBASIC0.98□□□□□ -2.25
HLA-DQB2P05538 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.98□□□□□ -2.25
HLA-DQB2P05538 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
HLA-DQB2P05538 LINC02555-201ENST00000563933 1951 ntBASIC0.98□□□□□ -2.25
HLA-DQB2P05538 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.98□□□□□ -2.25
HLA-DQB2P05538 RPS27P16-201ENST00000425758 201 ntBASIC0.98□□□□□ -2.25
HLA-DQB2P05538 UBE2V1P8-201ENST00000437166 265 ntBASIC0.98□□□□□ -2.25
HLA-DQB2P05538 AC006026.2-201ENST00000457376 180 ntBASIC0.98□□□□□ -2.25
HLA-DQB2P05538 RNU1-131P-201ENST00000458943 161 ntBASIC0.98□□□□□ -2.25
HLA-DQB2P05538 TOMM22P6-201ENST00000465035 409 ntBASIC0.98□□□□□ -2.25
HLA-DQB2P05538 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.98□□□□□ -2.25
HLA-DQB2P05538 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.98□□□□□ -2.25
HLA-DQB2P05538 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.98□□□□□ -2.25
HLA-DQB2P05538 RNU6-1003P-201ENST00000517099 105 ntBASIC0.98□□□□□ -2.25
HLA-DQB2P05538 RNU6-201P-201ENST00000517100 61 ntBASIC0.98□□□□□ -2.25
HLA-DQB2P05538 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.98□□□□□ -2.25
HLA-DQB2P05538 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.98□□□□□ -2.25
HLA-DQB2P05538 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
HLA-DQB2P05538 AC019288.1-201ENST00000557918 224 ntBASIC0.98□□□□□ -2.25
HLA-DQB2P05538 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.98□□□□□ -2.25
HLA-DQB2P05538 AC012414.6-201ENST00000568241 401 ntBASIC0.98□□□□□ -2.25
HLA-DQB2P05538 AL353778.1-201ENST00000603149 408 ntBASIC0.98□□□□□ -2.25
HLA-DQB2P05538 AL139022.2-201ENST00000606934 443 ntBASIC0.98□□□□□ -2.25
HLA-DQB2P05538 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.98□□□□□ -2.25
HLA-DQB2P05538 AC120349.3-201ENST00000624377 529 ntBASIC0.98□□□□□ -2.25
HLA-DQB2P05538 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
HLA-DQB2P05538 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms