Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 HMGB1P33-201ENST00000563485 527 ntBASIC2.53□□□□□ -2
BEST1O76090 AC093249.1-201ENST00000567049 203 ntBASIC2.53□□□□□ -2
BEST1O76090 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.53□□□□□ -2
BEST1O76090 VN1R80P-201ENST00000597126 338 ntBASIC2.53□□□□□ -2
BEST1O76090 AL670379.2-201ENST00000604983 252 ntBASIC2.53□□□□□ -2
BEST1O76090 AC103705.1-201ENST00000619013 241 ntBASIC2.53□□□□□ -2
BEST1O76090 AC097372.5-201ENST00000623665 376 ntBASIC2.53□□□□□ -2
BEST1O76090 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.53□□□□□ -2
BEST1O76090 FO624990.1-201ENST00000636373 85 ntBASIC2.53□□□□□ -2
BEST1O76090 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
BEST1O76090 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
BEST1O76090 Z82209.1-201ENST00000422141 2135 ntBASIC2.53□□□□□ -2.01
BEST1O76090 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.52□□□□□ -2.01
BEST1O76090 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
BEST1O76090 AC016717.2-201ENST00000609089 5141 ntBASIC2.52□□□□□ -2.01
BEST1O76090 RNA5SP393-201ENST00000363423 117 ntBASIC2.52□□□□□ -2.01
BEST1O76090 RNU6-336P-201ENST00000364891 107 ntBASIC2.52□□□□□ -2.01
BEST1O76090 RNU4-66P-201ENST00000365199 138 ntBASIC2.52□□□□□ -2.01
BEST1O76090 RNU6-293P-201ENST00000411259 106 ntBASIC2.52□□□□□ -2.01
BEST1O76090 POLHP1-201ENST00000411806 470 ntBASIC2.52□□□□□ -2.01
BEST1O76090 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.52□□□□□ -2.01
BEST1O76090 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.52□□□□□ -2.01
BEST1O76090 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.52□□□□□ -2.01
BEST1O76090 AC243964.1-201ENST00000441814 261 ntBASIC2.52□□□□□ -2.01
BEST1O76090 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.52□□□□□ -2.01
BEST1O76090 AC009238.1-201ENST00000442165 424 ntBASIC2.52□□□□□ -2.01
BEST1O76090 AC009237.6-201ENST00000446969 424 ntBASIC2.52□□□□□ -2.01
BEST1O76090 AL031274.1-201ENST00000450334 232 ntBASIC2.52□□□□□ -2.01
BEST1O76090 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.52□□□□□ -2.01
BEST1O76090 RNU7-138P-201ENST00000459479 64 ntBASIC2.52□□□□□ -2.01
BEST1O76090 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.52□□□□□ -2.01
BEST1O76090 AC021269.2-201ENST00000532318 330 ntBASIC2.52□□□□□ -2.01
BEST1O76090 AC025165.5-201ENST00000602802 578 ntBASIC2.52□□□□□ -2.01
BEST1O76090 RNU6-85P-201ENST00000605989 107 ntBASIC2.52□□□□□ -2.01
BEST1O76090 AC064807.4-201ENST00000607201 407 ntBASIC2.52□□□□□ -2.01
BEST1O76090 MIR1291-201ENST00000627649 87 ntBASIC2.52□□□□□ -2.01
BEST1O76090 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
BEST1O76090 MIR21-201ENST00000362134 72 ntBASIC2.51□□□□□ -2.01
BEST1O76090 Y_RNA.41-201ENST00000362646 102 ntBASIC2.51□□□□□ -2.01
BEST1O76090 SNORA67.1-201ENST00000364749 141 ntBASIC2.51□□□□□ -2.01
BEST1O76090 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
BEST1O76090 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.51□□□□□ -2.01
BEST1O76090 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.51□□□□□ -2.01
BEST1O76090 AL139413.1-201ENST00000421309 217 ntBASIC2.51□□□□□ -2.01
BEST1O76090 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.51□□□□□ -2.01
BEST1O76090 SEPT14P3-201ENST00000439401 183 ntBASIC2.51□□□□□ -2.01
BEST1O76090 AL732372.2-207ENST00000445840 183 ntBASIC2.51□□□□□ -2.01
BEST1O76090 SEPT14P2-201ENST00000453405 183 ntBASIC2.51□□□□□ -2.01
BEST1O76090 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.51□□□□□ -2.01
BEST1O76090 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.51□□□□□ -2.01
BEST1O76090 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.51□□□□□ -2.01
BEST1O76090 AK3P2-201ENST00000507976 429 ntBASIC2.51□□□□□ -2.01
BEST1O76090 SEPT14P4-201ENST00000513445 186 ntBASIC2.51□□□□□ -2.01
BEST1O76090 SNORD60.2-201ENST00000516883 86 ntBASIC2.51□□□□□ -2.01
BEST1O76090 FO082796.1-201ENST00000523795 183 ntBASIC2.51□□□□□ -2.01
BEST1O76090 CYCSP26-201ENST00000534107 320 ntBASIC2.51□□□□□ -2.01
BEST1O76090 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.51□□□□□ -2.01
BEST1O76090 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.51□□□□□ -2.01
BEST1O76090 AL162413.1-201ENST00000603198 110 ntBASIC2.51□□□□□ -2.01
BEST1O76090 AL356157.2-201ENST00000605122 111 ntBASIC2.51□□□□□ -2.01
BEST1O76090 AC092954.2-201ENST00000609103 430 ntBASIC2.51□□□□□ -2.01
BEST1O76090 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
BEST1O76090 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.51□□□□□ -2.01
BEST1O76090 RNU6-428P-201ENST00000362942 107 ntBASIC2.5□□□□□ -2.01
BEST1O76090 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
BEST1O76090 RNU6-1032P-201ENST00000384100 107 ntBASIC2.5□□□□□ -2.01
BEST1O76090 RNU1-148P-201ENST00000384472 162 ntBASIC2.5□□□□□ -2.01
BEST1O76090 SNORA41-201ENST00000384675 132 ntBASIC2.5□□□□□ -2.01
BEST1O76090 SNORD116-4-201ENST00000384733 96 ntBASIC2.5□□□□□ -2.01
BEST1O76090 MIR29B2-201ENST00000385055 81 ntBASIC2.5□□□□□ -2.01
BEST1O76090 MIR524-201ENST00000385242 87 ntBASIC2.5□□□□□ -2.01
BEST1O76090 RNU6-1106P-201ENST00000390845 107 ntBASIC2.5□□□□□ -2.01
BEST1O76090 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.5□□□□□ -2.01
BEST1O76090 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.5□□□□□ -2.01
BEST1O76090 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.5□□□□□ -2.01
BEST1O76090 AC068781.1-201ENST00000488231 618 ntBASIC2.5□□□□□ -2.01
BEST1O76090 Y_RNA.654-201ENST00000497848 106 ntBASIC2.5□□□□□ -2.01
BEST1O76090 RPS27P27-201ENST00000498779 255 ntBASIC2.5□□□□□ -2.01
BEST1O76090 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.5□□□□□ -2.01
BEST1O76090 AC008413.1-201ENST00000511864 177 ntBASIC2.5□□□□□ -2.01
BEST1O76090 TBCAP3-201ENST00000512475 312 ntBASIC2.5□□□□□ -2.01
BEST1O76090 RNU6-1281P-201ENST00000516223 105 ntBASIC2.5□□□□□ -2.01
BEST1O76090 RN7SKP256-201ENST00000517201 314 ntBASIC2.5□□□□□ -2.01
BEST1O76090 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.5□□□□□ -2.01
BEST1O76090 AC118273.2-201ENST00000532092 465 ntBASIC2.5□□□□□ -2.01
BEST1O76090 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.5□□□□□ -2.01
BEST1O76090 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.5□□□□□ -2.01
BEST1O76090 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.5□□□□□ -2.01
BEST1O76090 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.5□□□□□ -2.01
BEST1O76090 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.49□□□□□ -2.01
BEST1O76090 RNU6-827P-201ENST00000365553 106 ntBASIC2.49□□□□□ -2.01
BEST1O76090 MIR181A1-201ENST00000385026 110 ntBASIC2.49□□□□□ -2.01
BEST1O76090 AL445529.1-201ENST00000398713 389 ntBASIC2.49□□□□□ -2.01
BEST1O76090 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.49□□□□□ -2.01
BEST1O76090 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.49□□□□□ -2.01
BEST1O76090 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.49□□□□□ -2.01
BEST1O76090 USP9YP8-201ENST00000441913 500 ntBASIC2.49□□□□□ -2.01
BEST1O76090 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.49□□□□□ -2.01
BEST1O76090 MTND3P16-201ENST00000452205 344 ntBASIC2.49□□□□□ -2.01
BEST1O76090 AC087884.1-201ENST00000469738 328 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms