Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PROM1O43490 MTND5P9-201ENST00000503854 1755 ntBASIC3.28□□□□□ -1.89
PROM1O43490 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PROM1O43490 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
PROM1O43490 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PROM1O43490 AC008669.1-201ENST00000565823 2178 ntBASIC3.27□□□□□ -1.89
PROM1O43490 FTLP6-201ENST00000355274 422 ntBASIC3.27□□□□□ -1.89
PROM1O43490 Y_RNA.193-201ENST00000363979 102 ntBASIC3.27□□□□□ -1.89
PROM1O43490 RNU6-702P-201ENST00000364982 107 ntBASIC3.27□□□□□ -1.89
PROM1O43490 SNORD14.1-201ENST00000365609 90 ntBASIC3.27□□□□□ -1.89
PROM1O43490 RNU6-658P-201ENST00000384606 106 ntBASIC3.27□□□□□ -1.89
PROM1O43490 AL138885.1-201ENST00000405921 675 ntBASIC3.27□□□□□ -1.89
PROM1O43490 RNA5SP31-201ENST00000411144 127 ntBASIC3.27□□□□□ -1.89
PROM1O43490 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.27□□□□□ -1.89
PROM1O43490 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.27□□□□□ -1.89
PROM1O43490 RPL23AP67-201ENST00000465341 474 ntBASIC3.27□□□□□ -1.89
PROM1O43490 MRPS35P2-201ENST00000508242 191 ntBASIC3.27□□□□□ -1.89
PROM1O43490 AC006445.2-201ENST00000510061 472 ntBASIC3.27□□□□□ -1.89
PROM1O43490 RNU6-612P-201ENST00000516909 102 ntBASIC3.27□□□□□ -1.89
PROM1O43490 AC110588.1-201ENST00000559699 137 ntBASIC3.27□□□□□ -1.89
PROM1O43490 MIR8076-201ENST00000611401 83 ntBASIC3.27□□□□□ -1.89
PROM1O43490 AL138825.1-201ENST00000618587 192 ntBASIC3.27□□□□□ -1.89
PROM1O43490 AC007792.1-201ENST00000623023 402 ntBASIC3.27□□□□□ -1.89
PROM1O43490 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.27□□□□□ -1.89
PROM1O43490 MIR4272-201ENST00000635924 64 ntBASIC3.27□□□□□ -1.89
PROM1O43490 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
PROM1O43490 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PROM1O43490 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
PROM1O43490 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.26□□□□□ -1.89
PROM1O43490 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PROM1O43490 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PROM1O43490 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.26□□□□□ -1.89
PROM1O43490 ZNF299P-201ENST00000406845 1804 ntBASIC3.26□□□□□ -1.89
PROM1O43490 Y_RNA.152-201ENST00000363578 100 ntBASIC3.26□□□□□ -1.89
PROM1O43490 RNU4-42P-201ENST00000364738 142 ntBASIC3.26□□□□□ -1.89
PROM1O43490 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.26□□□□□ -1.89
PROM1O43490 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.26□□□□□ -1.89
PROM1O43490 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.26□□□□□ -1.89
PROM1O43490 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.26□□□□□ -1.89
PROM1O43490 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.26□□□□□ -1.89
PROM1O43490 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.26□□□□□ -1.89
PROM1O43490 AL731563.1-201ENST00000442202 214 ntBASIC3.26□□□□□ -1.89
PROM1O43490 AC125238.1-201ENST00000448842 249 ntBASIC3.26□□□□□ -1.89
PROM1O43490 AC112492.4-201ENST00000456549 352 ntBASIC3.26□□□□□ -1.89
PROM1O43490 RPS4XP2-201ENST00000458402 793 ntBASIC3.26□□□□□ -1.89
PROM1O43490 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.26□□□□□ -1.89
PROM1O43490 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.26□□□□□ -1.89
PROM1O43490 AC022616.4-201ENST00000522985 181 ntBASIC3.26□□□□□ -1.89
PROM1O43490 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.26□□□□□ -1.89
PROM1O43490 AC006600.1-201ENST00000572529 153 ntBASIC3.26□□□□□ -1.89
PROM1O43490 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.26□□□□□ -1.89
PROM1O43490 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.26□□□□□ -1.89
PROM1O43490 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.26□□□□□ -1.89
PROM1O43490 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.26□□□□□ -1.89
PROM1O43490 AC006557.5-201ENST00000603126 811 ntBASIC3.26□□□□□ -1.89
PROM1O43490 PRR13P7-201ENST00000605538 430 ntBASIC3.26□□□□□ -1.89
PROM1O43490 AC107294.3-201ENST00000609211 526 ntBASIC3.26□□□□□ -1.89
PROM1O43490 AC090425.1-201ENST00000610007 140 ntBASIC3.26□□□□□ -1.89
PROM1O43490 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PROM1O43490 SCARNA15.3-201ENST00000626315 122 ntBASIC3.26□□□□□ -1.89
PROM1O43490 SCARNA4.1-201ENST00000628597 123 ntBASIC3.26□□□□□ -1.89
PROM1O43490 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
PROM1O43490 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PROM1O43490 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PROM1O43490 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.25□□□□□ -1.89
PROM1O43490 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PROM1O43490 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
PROM1O43490 RNA5SP50-201ENST00000363731 107 ntBASIC3.25□□□□□ -1.89
PROM1O43490 Y_RNA.210-201ENST00000364161 110 ntBASIC3.25□□□□□ -1.89
PROM1O43490 RNU6-1027P-201ENST00000383998 107 ntBASIC3.25□□□□□ -1.89
PROM1O43490 SNORA48.2-201ENST00000390926 124 ntBASIC3.25□□□□□ -1.89
PROM1O43490 SNORD17-201ENST00000390930 237 ntBASIC3.25□□□□□ -1.89
PROM1O43490 RNU6-700P-201ENST00000391043 107 ntBASIC3.25□□□□□ -1.89
PROM1O43490 RNA5SP252-201ENST00000391131 119 ntBASIC3.25□□□□□ -1.89
PROM1O43490 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PROM1O43490 AC007098.1-201ENST00000420122 367 ntBASIC3.25□□□□□ -1.89
PROM1O43490 EIF4EP2-201ENST00000422816 654 ntBASIC3.25□□□□□ -1.89
PROM1O43490 AC092047.1-201ENST00000424997 240 ntBASIC3.25□□□□□ -1.89
PROM1O43490 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.25□□□□□ -1.89
PROM1O43490 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.25□□□□□ -1.89
PROM1O43490 RPL23AP22-201ENST00000437556 453 ntBASIC3.25□□□□□ -1.89
PROM1O43490 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.25□□□□□ -1.89
PROM1O43490 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.25□□□□□ -1.89
PROM1O43490 CHEK2P4-201ENST00000450340 246 ntBASIC3.25□□□□□ -1.89
PROM1O43490 RN7SL601P-201ENST00000471221 293 ntBASIC3.25□□□□□ -1.89
PROM1O43490 AC025518.1-201ENST00000479856 347 ntBASIC3.25□□□□□ -1.89
PROM1O43490 AC144568.1-201ENST00000520139 137 ntBASIC3.25□□□□□ -1.89
PROM1O43490 AC131281.1-201ENST00000522984 164 ntBASIC3.25□□□□□ -1.89
PROM1O43490 CASP1P1-201ENST00000526345 212 ntBASIC3.25□□□□□ -1.89
PROM1O43490 AC010186.2-204ENST00000537668 439 ntBASIC3.25□□□□□ -1.89
PROM1O43490 H3F3AP1-201ENST00000559984 334 ntBASIC3.25□□□□□ -1.89
PROM1O43490 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.25□□□□□ -1.89
PROM1O43490 AC090617.7-201ENST00000623952 126 ntBASIC3.25□□□□□ -1.89
PROM1O43490 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.25□□□□□ -1.89
PROM1O43490 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
PROM1O43490 AC007496.3-201ENST00000624987 3443 ntBASIC3.25□□□□□ -1.89
PROM1O43490 AL356274.2-201ENST00000624379 3752 ntBASIC3.25□□□□□ -1.89
PROM1O43490 AL049781.1-201ENST00000623195 3585 ntBASIC3.25□□□□□ -1.89
PROM1O43490 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.25□□□□□ -1.89
PROM1O43490 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms