Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.55□□□□□ -1.68
H3BM21 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
H3BM21 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
H3BM21 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
H3BM21 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.55□□□□□ -1.68
H3BM21 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
H3BM21 AC092268.1-201ENST00000342691 405 ntBASIC4.55□□□□□ -1.68
H3BM21 RNU1-83P-201ENST00000363426 164 ntBASIC4.55□□□□□ -1.68
H3BM21 SNORD18B-201ENST00000365659 72 ntBASIC4.55□□□□□ -1.68
H3BM21 SNORA79-201ENST00000408376 140 ntBASIC4.55□□□□□ -1.68
H3BM21 RNU6-712P-201ENST00000410558 100 ntBASIC4.55□□□□□ -1.68
H3BM21 Y_RNA.622-201ENST00000411091 108 ntBASIC4.55□□□□□ -1.68
H3BM21 RNU6-1245P-201ENST00000411130 106 ntBASIC4.55□□□□□ -1.68
H3BM21 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.55□□□□□ -1.68
H3BM21 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.55□□□□□ -1.68
H3BM21 IFNWP4-201ENST00000453148 294 ntBASIC4.55□□□□□ -1.68
H3BM21 snoU13.6-201ENST00000458785 104 ntBASIC4.55□□□□□ -1.68
H3BM21 RNU7-141P-201ENST00000459304 62 ntBASIC4.55□□□□□ -1.68
H3BM21 AC091153.1-201ENST00000466297 402 ntBASIC4.55□□□□□ -1.68
H3BM21 UQCRHP4-201ENST00000471686 272 ntBASIC4.55□□□□□ -1.68
H3BM21 AC091179.3-201ENST00000474761 144 ntBASIC4.55□□□□□ -1.68
H3BM21 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.55□□□□□ -1.68
H3BM21 AC105129.1-201ENST00000560250 297 ntBASIC4.55□□□□□ -1.68
H3BM21 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.55□□□□□ -1.68
H3BM21 MIR3202-2-201ENST00000635980 79 ntBASIC4.55□□□□□ -1.68
H3BM21 MIR6830-201ENST00000636015 70 ntBASIC4.55□□□□□ -1.68
H3BM21 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.55□□□□□ -1.68
H3BM21 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
H3BM21 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
H3BM21 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
H3BM21 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
H3BM21 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
H3BM21 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.55□□□□□ -1.68
H3BM21 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
H3BM21 AC022336.2-201ENST00000568966 2538 ntBASIC4.54□□□□□ -1.68
H3BM21 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
H3BM21 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
H3BM21 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
H3BM21 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
H3BM21 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
H3BM21 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
H3BM21 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
H3BM21 RNU6-508P-201ENST00000363231 103 ntBASIC4.54□□□□□ -1.68
H3BM21 RNY1P10-201ENST00000363268 113 ntBASIC4.54□□□□□ -1.68
H3BM21 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.54□□□□□ -1.68
H3BM21 GPM6BP3-201ENST00000442797 145 ntBASIC4.54□□□□□ -1.68
H3BM21 TDGF1P1-201ENST00000445734 527 ntBASIC4.54□□□□□ -1.68
H3BM21 RN7SL585P-201ENST00000470538 280 ntBASIC4.54□□□□□ -1.68
H3BM21 SNORA43.2-201ENST00000516652 128 ntBASIC4.54□□□□□ -1.68
H3BM21 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.54□□□□□ -1.68
H3BM21 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC4.54□□□□□ -1.68
H3BM21 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.54□□□□□ -1.68
H3BM21 AC131055.1-201ENST00000584626 316 ntBASIC4.54□□□□□ -1.68
H3BM21 AC091979.2-201ENST00000607514 214 ntBASIC4.54□□□□□ -1.68
H3BM21 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.54□□□□□ -1.68
H3BM21 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
H3BM21 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
H3BM21 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.54□□□□□ -1.68
H3BM21 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.54□□□□□ -1.68
H3BM21 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
H3BM21 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
H3BM21 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
H3BM21 AL513302.2-201ENST00000562313 1842 ntBASIC4.53□□□□□ -1.68
H3BM21 RNA5SP509-201ENST00000364577 119 ntBASIC4.53□□□□□ -1.68
H3BM21 RNU6-1134P-201ENST00000365156 101 ntBASIC4.53□□□□□ -1.68
H3BM21 Y_RNA.368-201ENST00000365547 113 ntBASIC4.53□□□□□ -1.68
H3BM21 RNU6-1014P-201ENST00000383940 103 ntBASIC4.53□□□□□ -1.68
H3BM21 Y_RNA.549-201ENST00000384657 102 ntBASIC4.53□□□□□ -1.68
H3BM21 AL031003.1-201ENST00000404229 172 ntBASIC4.53□□□□□ -1.68
H3BM21 RNU6-855P-201ENST00000410395 104 ntBASIC4.53□□□□□ -1.68
H3BM21 RNU6-710P-201ENST00000410424 105 ntBASIC4.53□□□□□ -1.68
H3BM21 RPS26P2-201ENST00000440331 348 ntBASIC4.53□□□□□ -1.68
H3BM21 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.53□□□□□ -1.68
H3BM21 ANP32BP2-201ENST00000454525 545 ntBASIC4.53□□□□□ -1.68
H3BM21 AC109327.1-201ENST00000471666 403 ntBASIC4.53□□□□□ -1.68
H3BM21 HSPE1P6-201ENST00000479457 291 ntBASIC4.53□□□□□ -1.68
H3BM21 AL049874.1-201ENST00000489560 388 ntBASIC4.53□□□□□ -1.68
H3BM21 RN7SKP234-201ENST00000517173 224 ntBASIC4.53□□□□□ -1.68
H3BM21 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
H3BM21 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.53□□□□□ -1.68
H3BM21 AC107016.1-201ENST00000550463 337 ntBASIC4.53□□□□□ -1.68
H3BM21 IPO5P1-202ENST00000600039 287 ntBASIC4.53□□□□□ -1.68
H3BM21 SNORD115-40-201ENST00000606510 82 ntBASIC4.53□□□□□ -1.68
H3BM21 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.53□□□□□ -1.68
H3BM21 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.53□□□□□ -1.68
H3BM21 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
H3BM21 AC025031.4-201ENST00000621248 3271 ntBASIC4.53□□□□□ -1.68
H3BM21 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
H3BM21 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
H3BM21 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
H3BM21 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3BM21 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.52□□□□□ -1.69
H3BM21 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
H3BM21 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
H3BM21 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
H3BM21 AP001273.1-201ENST00000624493 3152 ntBASIC4.52□□□□□ -1.69
H3BM21 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3BM21 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.52□□□□□ -1.69
H3BM21 RNU6-1285P-201ENST00000363480 105 ntBASIC4.52□□□□□ -1.69
H3BM21 RNU6-454P-201ENST00000364292 107 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms