Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 SNORA31.23-201ENST00000517219 133 ntBASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 MTND4P7-201ENST00000523876 130 ntBASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 AC090115.3-201ENST00000553218 849 ntBASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 AL118558.2-201ENST00000556294 238 ntBASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 AL121917.1-203ENST00000605534 577 ntBASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 AC002044.1-201ENST00000606707 158 ntBASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 RNU6-91P-201ENST00000607774 107 ntBASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 Y_RNA.480-201ENST00000384364 102 ntBASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 MIR524-201ENST00000385242 87 ntBASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 HMGN2P3-201ENST00000433603 273 ntBASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 HMGN2P5-201ENST00000436882 273 ntBASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 DYNLL1P5-201ENST00000467158 270 ntBASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 AC087884.1-201ENST00000469738 328 ntBASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 HMGB3P3-201ENST00000510526 400 ntBASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 AC087241.2-201ENST00000535801 324 ntBASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 OR11H5P-201ENST00000554039 926 ntBASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 MIR4765-201ENST00000585007 77 ntBASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 AC123912.5-201ENST00000605470 343 ntBASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 AL021997.1-201ENST00000605757 193 ntBASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 AL359854.1-201ENST00000614203 1594 ntBASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 AC026585.1-201ENST00000619582 524 ntBASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 AC024581.2-201ENST00000619986 252 ntBASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 MIR219B-201ENST00000637023 88 ntBASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 MIR1321-201ENST00000637766 79 ntBASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
NEDD8-MDP1E9PL57 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 RBBP8P1-201ENST00000449447 1844 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 Y_RNA.167-201ENST00000363735 109 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-622P-201ENST00000384272 103 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-1215P-201ENST00000384441 102 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-220P-201ENST00000390919 107 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 AL590002.1-201ENST00000406554 418 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-1068P-201ENST00000410958 103 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 AC074117.2-201ENST00000417130 397 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 RPL30P4-201ENST00000429309 333 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 MTND3P16-201ENST00000452205 344 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-1281P-201ENST00000516223 105 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-1038P-201ENST00000516516 104 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 SCARNA3-201ENST00000517097 143 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 HSPE1P18-201ENST00000517602 280 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 AC023050.3-201ENST00000541142 333 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 AC079598.5-201ENST00000547460 117 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 AL157687.1-201ENST00000554853 619 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 MIR5694-201ENST00000581190 76 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 AL356280.1-201ENST00000603614 379 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 YWHAEP7-203ENST00000622054 312 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 AC244517.12-201ENST00000623581 663 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 U4.7-201ENST00000638126 106 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 MTND4P27-201ENST00000450813 1354 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 MTND5P30-201ENST00000452896 1731 ntBASIC2.2□□□□□ -2.06
NEDD8-MDP1E9PL57 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-858P-201ENST00000362436 107 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-37P-201ENST00000362692 107 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-78P-201ENST00000362897 107 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-266P-201ENST00000364225 107 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-11P-201ENST00000364234 107 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-25P-201ENST00000383873 107 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-1-201ENST00000383898 107 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-48P-201ENST00000384161 107 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-36P-201ENST00000384172 107 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-4P-201ENST00000384205 107 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-5P-201ENST00000384238 107 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-3P-201ENST00000384314 107 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-16P-201ENST00000384385 107 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 SNORD116-20-201ENST00000384529 92 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-15P-201ENST00000384534 107 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-2-201ENST00000384627 107 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-29P-201ENST00000384637 107 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-9-201ENST00000384776 107 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-33P-201ENST00000384793 107 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 MIR218-1-201ENST00000384999 110 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 MIR514A2-201ENST00000385131 88 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms