Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
LOC102724428A0A0B4J2F2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LOC102724428A0A0B4J2F2 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LOC102724428A0A0B4J2F2 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
LOC102724428A0A0B4J2F2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 MIR32-201ENST00000384965 70 ntBASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 RPS4XP3-201ENST00000398541 413 ntBASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 RNU2-61P-201ENST00000411069 191 ntBASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 RPS12P23-201ENST00000419579 400 ntBASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 MTCO1P5-201ENST00000433573 344 ntBASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 AL353705.4-201ENST00000449661 238 ntBASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 IGKV2-26-201ENST00000518305 343 ntBASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 RPL23AP88-201ENST00000605759 454 ntBASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 LINC00901.1-201ENST00000617252 152 ntBASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
LOC102724428A0A0B4J2F2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 RNU6-105P-201ENST00000363909 104 ntBASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 Y_RNA.233-201ENST00000364407 101 ntBASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 Y_RNA.240-201ENST00000364469 95 ntBASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 RNU6-72P-201ENST00000384285 79 ntBASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 HLFP1-201ENST00000402375 499 ntBASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 SNORD12B-201ENST00000410433 91 ntBASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 RNU2-68P-201ENST00000410878 191 ntBASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 AC244098.2-201ENST00000422068 99 ntBASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 RN7SL504P-201ENST00000494496 287 ntBASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 AP004371.1-201ENST00000525240 214 ntBASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 AK6P2-201ENST00000549020 471 ntBASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 MED28P6-201ENST00000558776 231 ntBASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 MIR3144-201ENST00000579460 79 ntBASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 MIR4325-201ENST00000583049 90 ntBASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 AL078605.1-201ENST00000603529 500 ntBASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 AP001485.1-201ENST00000604799 199 ntBASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 MIR6852-201ENST00000621699 66 ntBASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 AC027309.3-201ENST00000623419 351 ntBASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 AL359693.1-201ENST00000614959 2407 ntBASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 AC087190.4-201ENST00000574616 8334 ntBASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
LOC102724428A0A0B4J2F2 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 RNA5SP374-201ENST00000362939 125 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 SNORD115-32-201ENST00000364079 82 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 Y_RNA.275-201ENST00000364726 110 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 RNU6-81P-201ENST00000365608 104 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 Y_RNA.383-201ENST00000383855 97 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 RNU6-804P-201ENST00000384286 107 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 RNU6-21P-201ENST00000384710 107 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 RNA5SP213-201ENST00000391031 106 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 RNU6-394P-201ENST00000410735 107 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 RPL19P1-201ENST00000411635 428 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 NDUFB1P1-201ENST00000435191 180 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 Y_RNA.638-201ENST00000459374 113 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 KC877373.1-201ENST00000479066 408 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 RPL30P1-201ENST00000488676 339 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 RNU7-110P-201ENST00000516891 62 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 MTND5P41-201ENST00000517498 206 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 MRPS18CP4-201ENST00000535821 231 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 H3F3AP1-201ENST00000559984 334 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 AC090132.2-201ENST00000615881 347 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 SCARNA4-202ENST00000625402 129 ntBASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LOC102724428A0A0B4J2F2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LOC102724428A0A0B4J2F2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LOC102724428A0A0B4J2F2 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LOC102724428A0A0B4J2F2 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LOC102724428A0A0B4J2F2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
LOC102724428A0A0B4J2F2 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LOC102724428A0A0B4J2F2 SNORA25.1-201ENST00000362326 128 ntBASIC4.53□□□□□ -1.68
LOC102724428A0A0B4J2F2 Y_RNA.8-201ENST00000362353 102 ntBASIC4.53□□□□□ -1.68
LOC102724428A0A0B4J2F2 RNU1-108P-201ENST00000362556 161 ntBASIC4.53□□□□□ -1.68
LOC102724428A0A0B4J2F2 RNU6-527P-201ENST00000363425 104 ntBASIC4.53□□□□□ -1.68
LOC102724428A0A0B4J2F2 RNU6-918P-201ENST00000391219 106 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 233.7 ms