Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC097462.2-201ENST00000504623 481 ntBASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 SMURF2P1-201ENST00000514992 481 ntBASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 RNU6-470P-201ENST00000515954 104 ntBASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 SCARNA16.2-201ENST00000516520 172 ntBASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 SNORD59.2-201ENST00000516873 68 ntBASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 SNRPGP18-201ENST00000553000 214 ntBASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 AC025281.1-201ENST00000567026 265 ntBASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 MTCO3P13-201ENST00000577757 781 ntBASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 AC091152.3-201ENST00000604227 325 ntBASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 AP001836.1-201ENST00000604675 523 ntBASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 uc_338.25-201ENST00000613756 156 ntBASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 MTND5P27-201ENST00000428871 1720 ntBASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PCDHA3Q9Y5H8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 RNU6-858P-201ENST00000362436 107 ntBASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 RNU6-1115P-201ENST00000362490 106 ntBASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 RNU6-490P-201ENST00000362985 107 ntBASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 RNA5SP50-201ENST00000363731 107 ntBASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 SNORD46.1-201ENST00000364139 104 ntBASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 Y_RNA.445-201ENST00000384168 102 ntBASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 MIR490-201ENST00000384865 128 ntBASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 AL590004.1-201ENST00000405321 300 ntBASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 RNU6-1245P-201ENST00000411130 106 ntBASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 TRIAP1P1-201ENST00000427062 225 ntBASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 AC243964.1-201ENST00000441814 261 ntBASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 PRSS3P4-201ENST00000453323 162 ntBASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 SNORA31.23-201ENST00000517219 133 ntBASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 CBX3P7-201ENST00000532876 502 ntBASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 MIR5696-201ENST00000578474 85 ntBASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 MIR3171-201ENST00000584270 74 ntBASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 AL356157.2-201ENST00000605122 111 ntBASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 AC024581.2-201ENST00000619986 252 ntBASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 MTND4P27-201ENST00000450813 1354 ntBASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHA3Q9Y5H8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 SNORA63.1-201ENST00000362493 131 ntBASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 RNU6-784P-201ENST00000384330 106 ntBASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 BX276092.3-201ENST00000424182 230 ntBASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 MTND3P9-201ENST00000429526 346 ntBASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 AC009969.1-201ENST00000438726 172 ntBASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 AC007969.2-201ENST00000441891 191 ntBASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 AC090096.1-201ENST00000489168 390 ntBASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 RNU5F-8P-201ENST00000515941 111 ntBASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 AP003072.1-201ENST00000531740 145 ntBASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 ELOCP31-201ENST00000540463 467 ntBASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 AC069200.1-201ENST00000609511 323 ntBASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 AC241585.2-209ENST00000638217 143 ntBASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 AC010889.1-201ENST00000566193 2666 ntBASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 AC008669.1-201ENST00000565823 2178 ntBASIC3.31□□□□□ -1.88
PCDHA3Q9Y5H8 MTND5P30-201ENST00000452896 1731 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 Y_RNA.5-201ENST00000362334 102 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 SNORD56.1-201ENST00000362913 68 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 RNU1-33P-201ENST00000364249 162 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 Y_RNA.463-201ENST00000384271 102 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 RNU6-748P-201ENST00000384648 107 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 RNU6-19P-201ENST00000384718 107 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 RNU2-49P-201ENST00000410666 184 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 AC243428.1-201ENST00000421099 264 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 AC018865.2-201ENST00000423631 129 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 PTGES3P4-201ENST00000426243 356 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 UQCRHP3-201ENST00000451503 251 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 CYCSP35-201ENST00000451978 304 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 AC096576.1-201ENST00000489014 359 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 AC092185.1-201ENST00000491371 97 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 MTND4LP22-201ENST00000508209 276 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 RNU5B-3P-201ENST00000516601 115 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 Y_RNA.711-201ENST00000516993 102 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 RNU6-264P-201ENST00000517134 104 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 CKS1BP7-201ENST00000522230 235 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 SUB1P3-201ENST00000564581 315 ntBASIC3.3□□□□□ -1.88
PCDHA3Q9Y5H8 AC022432.1-201ENST00000595739 310 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms