Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SNORA25.12-201ENST00000516202 82 ntBASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 RNU6-971P-201ENST00000516920 106 ntBASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 MIR3923-201ENST00000579521 83 ntBASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 AC025946.2-201ENST00000603398 234 ntBASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 MIR6716-201ENST00000613413 80 ntBASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 ZNF137P-201ENST00000456718 1920 ntBASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 LINC01355-201ENST00000566551 5444 ntBASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHB11Q9Y5F2 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PCDHB11Q9Y5F2 MAPK10-286ENST00000641208 8747 ntBASIC4.51□□□□□ -1.69
PCDHB11Q9Y5F2 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
PCDHB11Q9Y5F2 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHB11Q9Y5F2 MIR513C-201ENST00000401352 84 ntBASIC4.51□□□□□ -1.69
PCDHB11Q9Y5F2 CBX3P9-201ENST00000402326 552 ntBASIC4.51□□□□□ -1.69
PCDHB11Q9Y5F2 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.51□□□□□ -1.69
PCDHB11Q9Y5F2 AP000873.1-201ENST00000463987 400 ntBASIC4.51□□□□□ -1.69
PCDHB11Q9Y5F2 AC109327.1-201ENST00000471666 403 ntBASIC4.51□□□□□ -1.69
PCDHB11Q9Y5F2 AC084357.1-201ENST00000473404 255 ntBASIC4.51□□□□□ -1.69
PCDHB11Q9Y5F2 RPS4XP13-201ENST00000483219 789 ntBASIC4.51□□□□□ -1.69
PCDHB11Q9Y5F2 RNU5F-2P-201ENST00000516066 82 ntBASIC4.51□□□□□ -1.69
PCDHB11Q9Y5F2 RNA5SP464-201ENST00000516251 108 ntBASIC4.51□□□□□ -1.69
PCDHB11Q9Y5F2 AC022616.8-201ENST00000533569 253 ntBASIC4.51□□□□□ -1.69
PCDHB11Q9Y5F2 AL359881.1-201ENST00000602916 267 ntBASIC4.51□□□□□ -1.69
PCDHB11Q9Y5F2 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDHB11Q9Y5F2 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDHB11Q9Y5F2 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDHB11Q9Y5F2 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 AC010329.5-201ENST00000623497 2174 ntBASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 Y_RNA.71-201ENST00000362892 104 ntBASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 snoU2_19.4-201ENST00000364329 80 ntBASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 Y_RNA.287-201ENST00000364853 94 ntBASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 SNORD116-14-201ENST00000383894 92 ntBASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 SNORD116-17-201ENST00000383929 92 ntBASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 SNORD116-15-201ENST00000384445 92 ntBASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 SNORD116-19-201ENST00000384729 92 ntBASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 RN7SKP27-201ENST00000410684 333 ntBASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 AC005300.1-201ENST00000428401 373 ntBASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 AC004975.1-201ENST00000428733 208 ntBASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 RPL36AP41-201ENST00000493820 306 ntBASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 RNU6-1333P-201ENST00000516162 93 ntBASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 RNU6-107P-201ENST00000516643 102 ntBASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 AC011471.1-201ENST00000585766 187 ntBASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 AC091979.2-201ENST00000607514 214 ntBASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 U3.53-201ENST00000628922 216 ntBASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHB11Q9Y5F2 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 AC068700.1-201ENST00000565862 3754 ntBASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 SNORA31-201ENST00000362607 130 ntBASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 SNORA8.3-201ENST00000384679 139 ntBASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 MIR626-201ENST00000385032 94 ntBASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 SNORD96B-201ENST00000386148 79 ntBASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 AL035461.1-201ENST00000421490 332 ntBASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 AC146507.2-201ENST00000460608 476 ntBASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 AC010618.1-201ENST00000469924 477 ntBASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 RPL31P41-201ENST00000477967 372 ntBASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 MIR3690-201ENST00000580266 75 ntBASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 AL034555.1-201ENST00000604816 211 ntBASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 AC068724.3-201ENST00000625906 87 ntBASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 MIR3199-2-201ENST00000636243 86 ntBASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 AL672167.1-203ENST00000641299 2975 ntBASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB11Q9Y5F2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 MAPK10-303ENST00000641324 3959 ntBASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 SNORD115-30-201ENST00000364117 82 ntBASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 MIR921-201ENST00000401133 56 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms