Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 RNU6-1287P-201ENST00000362914 107 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 RNU6-1120P-201ENST00000362988 108 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 RNU6-1060P-201ENST00000384664 107 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 RNU2-3P-201ENST00000410144 191 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 RNU6-607P-201ENST00000411283 108 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 MTND1P23-201ENST00000416931 372 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 MTCO2P19-201ENST00000427513 598 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 AL669831.1-202ENST00000428504 417 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 GTF2IP13-201ENST00000438487 386 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 AC003989.2-201ENST00000440224 169 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 CALM1P1-201ENST00000442082 433 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 AL356010.1-201ENST00000456364 102 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 GMFBP1-201ENST00000467831 427 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 MTCO3P9-201ENST00000506989 781 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 MTND3P25-201ENST00000509243 135 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 AC104136.1-201ENST00000512969 394 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 RNU6-237P-201ENST00000515985 71 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 MIR892C-201ENST00000516410 77 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 AP005435.4-201ENST00000529514 284 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 AC079598.5-201ENST00000547460 117 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 MIR3611-201ENST00000584484 83 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 AC073648.5-201ENST00000603502 305 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 AC008945.2-201ENST00000606056 604 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 AC005609.4-201ENST00000625071 447 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 ZNF680P1-201ENST00000436625 1469 ntBASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.99□□□□□ -2.09
UBQLN1Q9UMX0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 RNU6-486P-201ENST00000363116 107 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 RNU6-715P-201ENST00000365204 103 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 SNORA6-201ENST00000384033 151 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 MIR9-3-201ENST00000385084 90 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 RNU2-9P-201ENST00000410194 145 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 RNU4-46P-201ENST00000410818 138 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 HMGB3P2-201ENST00000411913 584 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 CYCSP33-201ENST00000414485 327 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 EIF4EP4-201ENST00000424916 578 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 RPL7P54-201ENST00000438336 674 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 AL441985.1-201ENST00000457727 251 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 snoU109.2-201ENST00000459316 135 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 MED28P2-201ENST00000475771 317 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 HMGB1P29-201ENST00000505659 499 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 AC108078.1-201ENST00000508073 725 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 RNA5SP112-201ENST00000515937 99 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 CR383656.8-201ENST00000549046 145 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 AC009090.3-201ENST00000616553 565 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 DUXAP9-208ENST00000622815 614 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 AC012640.5-201ENST00000623897 319 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 SCARNA4-202ENST00000625402 129 ntBASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.98□□□□□ -2.09
UBQLN1Q9UMX0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 RNU6-858P-201ENST00000362436 107 ntBASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 RNA5SP138-201ENST00000365098 114 ntBASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 RNU5A-6P-201ENST00000384136 116 ntBASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 RNU6-45P-201ENST00000384471 107 ntBASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 RNA5SP338-201ENST00000410495 85 ntBASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 AC003685.2-201ENST00000422795 395 ntBASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 SRIP2-201ENST00000428470 166 ntBASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 HMGB1P30-201ENST00000492455 606 ntBASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 AC104564.1-201ENST00000493028 407 ntBASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 RPL23AP63-201ENST00000498752 471 ntBASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 Y_RNA.687-201ENST00000516558 91 ntBASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 RNU6-405P-201ENST00000516637 110 ntBASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 RN7SKP219-201ENST00000516825 296 ntBASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 RNU6-548P-201ENST00000517083 115 ntBASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 AP004607.1-201ENST00000524456 203 ntBASIC1.97□□□□□ -2.09
UBQLN1Q9UMX0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms