Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ZNF271P-202ENST00000465539 1970 ntBASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
BLOC1S4Q9NUP1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
BLOC1S4Q9NUP1 ARL5AP1-201ENST00000418991 388 ntBASIC2.68□□□□□ -1.98
BLOC1S4Q9NUP1 RPL7P54-201ENST00000438336 674 ntBASIC2.68□□□□□ -1.98
BLOC1S4Q9NUP1 FDX1P2-201ENST00000450769 375 ntBASIC2.68□□□□□ -1.98
BLOC1S4Q9NUP1 AC011753.1-201ENST00000451001 220 ntBASIC2.68□□□□□ -1.98
BLOC1S4Q9NUP1 AC013470.1-201ENST00000453438 462 ntBASIC2.68□□□□□ -1.98
BLOC1S4Q9NUP1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.68□□□□□ -1.98
BLOC1S4Q9NUP1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.68□□□□□ -1.98
BLOC1S4Q9NUP1 RPL30P1-201ENST00000488676 339 ntBASIC2.68□□□□□ -1.98
BLOC1S4Q9NUP1 AC091885.1-201ENST00000506658 268 ntBASIC2.68□□□□□ -1.98
BLOC1S4Q9NUP1 RPL37P25-201ENST00000507308 276 ntBASIC2.68□□□□□ -1.98
BLOC1S4Q9NUP1 AC026436.1-201ENST00000510537 270 ntBASIC2.68□□□□□ -1.98
BLOC1S4Q9NUP1 RN7SKP256-201ENST00000517201 314 ntBASIC2.68□□□□□ -1.98
BLOC1S4Q9NUP1 AL159153.1-201ENST00000619688 317 ntBASIC2.68□□□□□ -1.98
BLOC1S4Q9NUP1 AL359880.1-201ENST00000621879 266 ntBASIC2.68□□□□□ -1.98
BLOC1S4Q9NUP1 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.68□□□□□ -1.98
BLOC1S4Q9NUP1 MIR1291-201ENST00000627649 87 ntBASIC2.68□□□□□ -1.98
BLOC1S4Q9NUP1 AL136360.1-201ENST00000503377 1900 ntBASIC2.68□□□□□ -1.98
BLOC1S4Q9NUP1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.67□□□□□ -1.98
BLOC1S4Q9NUP1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.67□□□□□ -1.98
BLOC1S4Q9NUP1 RNU6-623P-201ENST00000363143 105 ntBASIC2.67□□□□□ -1.98
BLOC1S4Q9NUP1 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.67□□□□□ -1.98
BLOC1S4Q9NUP1 AL122001.1-201ENST00000457027 370 ntBASIC2.67□□□□□ -1.98
BLOC1S4Q9NUP1 AC008571.1-201ENST00000467232 300 ntBASIC2.67□□□□□ -1.98
BLOC1S4Q9NUP1 RPL30P12-201ENST00000474666 353 ntBASIC2.67□□□□□ -1.98
BLOC1S4Q9NUP1 RPL9P6-201ENST00000492764 598 ntBASIC2.67□□□□□ -1.98
BLOC1S4Q9NUP1 CYCSP26-201ENST00000534107 320 ntBASIC2.67□□□□□ -1.98
BLOC1S4Q9NUP1 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.67□□□□□ -1.98
BLOC1S4Q9NUP1 MIR4424-201ENST00000585257 86 ntBASIC2.67□□□□□ -1.98
BLOC1S4Q9NUP1 APOOP1-201ENST00000604695 592 ntBASIC2.67□□□□□ -1.98
BLOC1S4Q9NUP1 AL356157.2-201ENST00000605122 111 ntBASIC2.67□□□□□ -1.98
BLOC1S4Q9NUP1 AC046143.2-201ENST00000609789 160 ntBASIC2.67□□□□□ -1.98
BLOC1S4Q9NUP1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.67□□□□□ -1.98
BLOC1S4Q9NUP1 AC090517.3-201ENST00000625170 141 ntBASIC2.67□□□□□ -1.98
BLOC1S4Q9NUP1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.67□□□□□ -1.98
BLOC1S4Q9NUP1 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.67□□□□□ -1.98
BLOC1S4Q9NUP1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.66□□□□□ -1.98
BLOC1S4Q9NUP1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.66□□□□□ -1.98
BLOC1S4Q9NUP1 RNU1-91P-201ENST00000364746 163 ntBASIC2.66□□□□□ -1.98
BLOC1S4Q9NUP1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
BLOC1S4Q9NUP1 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
BLOC1S4Q9NUP1 MIR544A-201ENST00000384855 91 ntBASIC2.66□□□□□ -1.98
BLOC1S4Q9NUP1 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.66□□□□□ -1.98
BLOC1S4Q9NUP1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.66□□□□□ -1.98
BLOC1S4Q9NUP1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.66□□□□□ -1.98
BLOC1S4Q9NUP1 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.66□□□□□ -1.98
BLOC1S4Q9NUP1 RNA5SP401-201ENST00000515920 127 ntBASIC2.66□□□□□ -1.98
BLOC1S4Q9NUP1 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.66□□□□□ -1.98
BLOC1S4Q9NUP1 AC090115.3-201ENST00000553218 849 ntBASIC2.66□□□□□ -1.98
BLOC1S4Q9NUP1 MIR3126-201ENST00000577443 74 ntBASIC2.66□□□□□ -1.98
BLOC1S4Q9NUP1 SNORD14A-201ENST00000606526 91 ntBASIC2.66□□□□□ -1.98
BLOC1S4Q9NUP1 AC004908.3-201ENST00000610248 625 ntBASIC2.66□□□□□ -1.98
BLOC1S4Q9NUP1 HULC.1-201ENST00000612720 240 ntBASIC2.66□□□□□ -1.98
BLOC1S4Q9NUP1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
BLOC1S4Q9NUP1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
BLOC1S4Q9NUP1 RNU1-148P-201ENST00000384472 162 ntBASIC2.65□□□□□ -1.99
BLOC1S4Q9NUP1 RPS29P13-201ENST00000402041 169 ntBASIC2.65□□□□□ -1.99
BLOC1S4Q9NUP1 RNA5SP181-201ENST00000410246 98 ntBASIC2.65□□□□□ -1.99
BLOC1S4Q9NUP1 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.65□□□□□ -1.99
BLOC1S4Q9NUP1 AL590556.1-201ENST00000423231 483 ntBASIC2.65□□□□□ -1.99
BLOC1S4Q9NUP1 AIMP1P2-201ENST00000425294 312 ntBASIC2.65□□□□□ -1.99
BLOC1S4Q9NUP1 AL121601.2-201ENST00000438019 707 ntBASIC2.65□□□□□ -1.99
BLOC1S4Q9NUP1 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.65□□□□□ -1.99
BLOC1S4Q9NUP1 MTCO2P7-201ENST00000446518 666 ntBASIC2.65□□□□□ -1.99
BLOC1S4Q9NUP1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.65□□□□□ -1.99
BLOC1S4Q9NUP1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.65□□□□□ -1.99
BLOC1S4Q9NUP1 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.65□□□□□ -1.99
BLOC1S4Q9NUP1 RNU6-189P-201ENST00000516120 101 ntBASIC2.65□□□□□ -1.99
BLOC1S4Q9NUP1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.65□□□□□ -1.99
BLOC1S4Q9NUP1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.65□□□□□ -1.99
BLOC1S4Q9NUP1 AC009127.3-201ENST00000570531 403 ntBASIC2.65□□□□□ -1.99
BLOC1S4Q9NUP1 AC123912.5-201ENST00000605470 343 ntBASIC2.65□□□□□ -1.99
BLOC1S4Q9NUP1 AC103591.3-201ENST00000608684 209 ntBASIC2.65□□□□□ -1.99
BLOC1S4Q9NUP1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 RNA5SP289-201ENST00000362332 137 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 RNU1-51P-201ENST00000365345 176 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 XGY1-201ENST00000381172 446 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 SNORA69-201ENST00000383895 132 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 RNU1-138P-201ENST00000384093 164 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 AL139095.1-201ENST00000404326 391 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 RNU6-293P-201ENST00000411259 106 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 RNA5SP270-201ENST00000411361 118 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 AL117339.3-201ENST00000418733 162 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 USP9YP18-201ENST00000425912 695 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 MTND3P21-201ENST00000433774 331 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 AC018634.1-201ENST00000437554 401 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 AL031274.1-201ENST00000450334 232 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 RNU7-138P-201ENST00000459479 64 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 AC068781.1-201ENST00000488231 618 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 AC234781.5-201ENST00000508429 271 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 Y_RNA.693-201ENST00000516641 110 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms