Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 AP000763.2-201ENST00000540641 163 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 SNORD114-26-201ENST00000363543 72 ntBASIC0.73□□□□□ -2.29
KIAA1549Q9HCM3 RNU6-512P-201ENST00000364438 103 ntBASIC0.73□□□□□ -2.29
KIAA1549Q9HCM3 MIR19A-201ENST00000384878 82 ntBASIC0.73□□□□□ -2.29
KIAA1549Q9HCM3 AL357139.1-201ENST00000407792 426 ntBASIC0.73□□□□□ -2.29
KIAA1549Q9HCM3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.73□□□□□ -2.29
KIAA1549Q9HCM3 MTND4P3-201ENST00000417829 541 ntBASIC0.73□□□□□ -2.29
KIAA1549Q9HCM3 RPS15AP10-201ENST00000432472 382 ntBASIC0.73□□□□□ -2.29
KIAA1549Q9HCM3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.73□□□□□ -2.29
KIAA1549Q9HCM3 MTCO2P25-201ENST00000447065 681 ntBASIC0.73□□□□□ -2.29
KIAA1549Q9HCM3 AC103851.1-201ENST00000506833 274 ntBASIC0.73□□□□□ -2.29
KIAA1549Q9HCM3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.73□□□□□ -2.29
KIAA1549Q9HCM3 AC025465.3-201ENST00000510570 311 ntBASIC0.73□□□□□ -2.29
KIAA1549Q9HCM3 AC079395.1-201ENST00000510981 262 ntBASIC0.73□□□□□ -2.29
KIAA1549Q9HCM3 RNU6-150P-201ENST00000516237 95 ntBASIC0.73□□□□□ -2.29
KIAA1549Q9HCM3 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.73□□□□□ -2.29
KIAA1549Q9HCM3 MTATP6P2-201ENST00000603319 678 ntBASIC0.73□□□□□ -2.29
KIAA1549Q9HCM3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.73□□□□□ -2.29
KIAA1549Q9HCM3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
KIAA1549Q9HCM3 LINC02555-201ENST00000563933 1951 ntBASIC0.73□□□□□ -2.29
KIAA1549Q9HCM3 RNA5SP493-201ENST00000364115 91 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 MIR29B2-201ENST00000385055 81 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 RNU2-36P-201ENST00000410361 191 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 MTCO1P17-201ENST00000411522 491 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 UBE2V1P10-201ENST00000414685 269 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 POLR2J4-204ENST00000418424 324 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 AC098862.1-201ENST00000504991 413 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 MTCYBP40-201ENST00000509390 1135 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 RNA5SP404-201ENST00000517118 132 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 NIFKP6-201ENST00000598115 845 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 AC093788.1-201ENST00000609356 927 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 SNORD114-6-201ENST00000364393 72 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 MIR598-201ENST00000384868 97 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 Y_RNA.597-201ENST00000410463 100 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 AC009646.1-201ENST00000510455 318 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 SNORD116-28-201ENST00000516123 91 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 AP003355.1-201ENST00000518956 587 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 AC018630.3-201ENST00000542637 96 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 AL512605.2-201ENST00000592972 256 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 BNIP3P27-201ENST00000599991 412 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 AC013470.4-201ENST00000619978 986 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 MIR6835-201ENST00000621552 64 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 AC130454.1-201ENST00000622948 401 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 AL136313.1-201ENST00000624804 202 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 AC008993.2-201ENST00000631744 806 ntBASIC0.72□□□□□ -2.29
KIAA1549Q9HCM3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.71□□□□□ -2.3
KIAA1549Q9HCM3 RNU6-1010P-201ENST00000362757 107 ntBASIC0.71□□□□□ -2.3
KIAA1549Q9HCM3 RNU1-139P-201ENST00000391307 165 ntBASIC0.71□□□□□ -2.3
KIAA1549Q9HCM3 RNU6-1025P-201ENST00000410629 104 ntBASIC0.71□□□□□ -2.3
KIAA1549Q9HCM3 RNU4-22P-201ENST00000411058 166 ntBASIC0.71□□□□□ -2.3
KIAA1549Q9HCM3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.71□□□□□ -2.3
KIAA1549Q9HCM3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.71□□□□□ -2.3
KIAA1549Q9HCM3 MTCO2P1-201ENST00000424648 477 ntBASIC0.71□□□□□ -2.3
KIAA1549Q9HCM3 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.71□□□□□ -2.3
KIAA1549Q9HCM3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.71□□□□□ -2.3
KIAA1549Q9HCM3 PTENP1-201ENST00000447117 1215 ntBASIC0.71□□□□□ -2.3
KIAA1549Q9HCM3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.71□□□□□ -2.3
KIAA1549Q9HCM3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.71□□□□□ -2.3
KIAA1549Q9HCM3 AC009712.1-201ENST00000564938 316 ntBASIC0.71□□□□□ -2.3
KIAA1549Q9HCM3 AL158163.2-201ENST00000619110 700 ntBASIC0.71□□□□□ -2.3
KIAA1549Q9HCM3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.71□□□□□ -2.3
KIAA1549Q9HCM3 Y_RNA.112-201ENST00000363250 102 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 RNU6-777P-201ENST00000364265 104 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 RNU6-733P-201ENST00000410759 104 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 RNU2-62P-201ENST00000410868 191 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AL135790.2-201ENST00000437701 267 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 MTCO1P44-201ENST00000441935 243 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 NEFMP1-201ENST00000443423 1006 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 DUXAP8-207ENST00000456786 622 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AP003034.1-201ENST00000534621 422 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms