Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 MRPL42P3-201ENST00000401492 326 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 Y_RNA.605-201ENST00000410577 105 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 AC138623.1-201ENST00000418060 216 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 MRPS18CP6-201ENST00000423587 223 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 AP000907.1-201ENST00000428428 510 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 RPL39P29-201ENST00000447779 157 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 AL513124.1-201ENST00000450410 614 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 GSTA11P-201ENST00000452866 669 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 AC008155.2-201ENST00000464337 397 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 RPL30P12-201ENST00000474666 353 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 CKS1BP7-201ENST00000522230 235 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 HSPE1P4-201ENST00000550617 308 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 AC105137.2-201ENST00000569073 466 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 AC004584.2-201ENST00000570407 410 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 MIR7851-201ENST00000610611 160 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 AC099778.2-201ENST00000610904 211 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 AC019176.2-201ENST00000611579 315 ntBASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC113Q9H0I3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 RNU4-35P-201ENST00000362588 141 ntBASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 RNU6-487P-201ENST00000365430 104 ntBASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 RNU6-738P-201ENST00000384531 106 ntBASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 RNU6-1222P-201ENST00000384615 107 ntBASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 MIR7-3-201ENST00000384898 110 ntBASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 RNU2-23P-201ENST00000410545 195 ntBASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 AC079354.2-201ENST00000453523 154 ntBASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 RN7SKP210-201ENST00000459176 261 ntBASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 RNU7-175P-201ENST00000515915 61 ntBASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 RNU5B-3P-201ENST00000516601 115 ntBASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 AC144568.1-201ENST00000520139 137 ntBASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 AC096772.1-201ENST00000609146 564 ntBASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 AC012314.7-201ENST00000619693 93 ntBASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 AC007792.1-201ENST00000623023 402 ntBASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC113Q9H0I3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 Y_RNA.496-201ENST00000384444 101 ntBASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 MIR184-201ENST00000384962 84 ntBASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 AL133475.1-201ENST00000404414 305 ntBASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 AL365496.1-201ENST00000426885 215 ntBASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 AC006989.1-201ENST00000427212 131 ntBASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 AL353705.4-201ENST00000449661 238 ntBASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 AC025518.1-201ENST00000479856 347 ntBASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 AP001025.1-201ENST00000486139 332 ntBASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 AC015911.1-201ENST00000495111 156 ntBASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 MIR4738-201ENST00000579134 87 ntBASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 AC090897.2-201ENST00000581715 130 ntBASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 AC008737.2-201ENST00000599446 118 ntBASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 MIR1244-1-201ENST00000612829 85 ntBASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 MIR7975-201ENST00000619350 68 ntBASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 MIR1244-3-201ENST00000635744 85 ntBASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 MIR1244-2-201ENST00000636449 85 ntBASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 MIR1244-4-202ENST00000636813 85 ntBASIC3.84□□□□□ -1.79
CCDC113Q9H0I3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CCDC113Q9H0I3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 MIR208A-201ENST00000362287 71 ntBASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 Y_RNA.145-201ENST00000363527 102 ntBASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 Y_RNA.158-201ENST00000363651 101 ntBASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 RNU6-1141P-201ENST00000364520 107 ntBASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 SNORA63C-201ENST00000364578 129 ntBASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 Y_RNA.504-201ENST00000384481 104 ntBASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 AL138885.1-201ENST00000405921 675 ntBASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 MTCYBP2-201ENST00000407745 171 ntBASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 RN7SKP111-201ENST00000410349 271 ntBASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 RNA5SP494-201ENST00000410653 129 ntBASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 AC016632.1-201ENST00000503994 196 ntBASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 AC021146.2-201ENST00000504736 556 ntBASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 MRPS36P4-201ENST00000534436 298 ntBASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 GNAI2P1-201ENST00000541815 315 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms