Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RPL21P17-201ENST00000397467 475 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 AL512633.1-201ENST00000399931 655 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 Y_RNA.617-201ENST00000410920 90 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 RNU6-603P-201ENST00000411403 107 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 AL591623.2-201ENST00000449978 222 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 Y_RNA.649-201ENST00000459077 103 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 U8.18-201ENST00000459285 133 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 RN7SL197P-201ENST00000466981 299 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 RN7SL807P-201ENST00000470923 297 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 RPL23AP70-201ENST00000483361 460 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 RNA5SP519-201ENST00000516480 119 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 MIR3945-201ENST00000581853 98 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 MIR3922-201ENST00000585192 84 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 AL356157.2-201ENST00000605122 111 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 AC116447.1-201ENST00000613153 453 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 AL136164.4-201ENST00000625013 2135 ntBASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 U8.1-201ENST00000362843 134 ntBASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 AL031121.1-201ENST00000406553 254 ntBASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 AC008065.1-201ENST00000428525 348 ntBASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 CYCSP35-201ENST00000451978 304 ntBASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 RNU6-237P-201ENST00000515985 71 ntBASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 AC120024.3-201ENST00000603167 156 ntBASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 AC024581.2-201ENST00000619986 252 ntBASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 MUC2-202ENST00000613187 4845 ntBASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
COL25A1Q9BXS0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 RNA5SP475-201ENST00000410568 110 ntBASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 Z85995.1-201ENST00000415547 335 ntBASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 AC074117.2-201ENST00000417130 397 ntBASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 FTH1P6-201ENST00000430768 320 ntBASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 AC099670.2-201ENST00000435130 321 ntBASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 RNA5SP230-201ENST00000517039 122 ntBASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 MIR4660-201ENST00000583549 74 ntBASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 AL672167.1-205ENST00000641112 3080 ntBASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 AP001029.2-203ENST00000589795 4910 ntBASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 PCAT14-202ENST00000627127 3935 ntBASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 MAPK10-328ENST00000641553 4009 ntBASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
COL25A1Q9BXS0 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.46□□□□□ -1.69
COL25A1Q9BXS0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.69
COL25A1Q9BXS0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.46□□□□□ -1.69
COL25A1Q9BXS0 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 RNU6-766P-201ENST00000362478 107 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 Y_RNA.120-201ENST00000363304 110 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 RNU6-356P-201ENST00000384140 107 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 MIR30B-201ENST00000384850 88 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 MIRLET7F2-201ENST00000385277 83 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 U6atac.2-201ENST00000408644 118 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms