Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 AC087441.2-201ENST00000529141 262 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 RPL30P11-203ENST00000598995 310 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 AC021646.1-201ENST00000605469 484 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 AC093788.1-201ENST00000609356 927 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 uc_338.5-201ENST00000611839 155 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 AL157786.1-207ENST00000627771 695 ntBASIC1.94□□□□□ -2.1
RPAP1Q9BWH6 MTND4P23-201ENST00000447723 1363 ntBASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 RNU6-61P-201ENST00000365528 109 ntBASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 SNORA20.2-201ENST00000383922 131 ntBASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 RNA5SP111-201ENST00000411386 101 ntBASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 UBE2V1P10-201ENST00000414685 269 ntBASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 AC008267.5-201ENST00000424928 265 ntBASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 RAP1BP2-201ENST00000478270 544 ntBASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 RNA5SP490-201ENST00000517141 136 ntBASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 AC109329.1-201ENST00000518744 317 ntBASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 AP004607.1-201ENST00000524456 203 ntBASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 MTCYBP33-201ENST00000575007 1130 ntBASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 MIR548AB-201ENST00000584917 84 ntBASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 BNIP3P30-201ENST00000601184 574 ntBASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 AC092354.1-201ENST00000606057 376 ntBASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 AC012360.2-201ENST00000609349 391 ntBASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 AL133173.2-201ENST00000614270 90 ntBASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 AC008121.3-201ENST00000618726 433 ntBASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
RPAP1Q9BWH6 RNU6-1010P-201ENST00000362757 107 ntBASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 RNU6-384P-201ENST00000364900 104 ntBASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 RNU6-169P-201ENST00000365336 107 ntBASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 MIR1276-201ENST00000408707 83 ntBASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 MTND5P25-201ENST00000430499 799 ntBASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 AC104850.1-201ENST00000435940 476 ntBASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 CALM1P1-201ENST00000442082 433 ntBASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 MTND6P13-201ENST00000443510 523 ntBASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 AMD1P1-201ENST00000457220 922 ntBASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 AC055731.1-201ENST00000474387 401 ntBASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 MRPS17P9-201ENST00000511924 393 ntBASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 RNU6-759P-201ENST00000516740 103 ntBASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 SNORA48.11-201ENST00000517015 89 ntBASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 MIR4760-201ENST00000585040 80 ntBASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 AC073410.2-201ENST00000603240 332 ntBASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 AL645939.4-201ENST00000604495 135 ntBASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 AL627230.6-201ENST00000611129 280 ntBASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 AC022202.1-201ENST00000613515 211 ntBASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.92□□□□□ -2.1
RPAP1Q9BWH6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 HAUS6P2-201ENST00000433254 2404 ntBASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 AL391987.6-201ENST00000305671 199 ntBASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 U8.3-201ENST00000363321 132 ntBASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 RNU6-553P-201ENST00000364047 96 ntBASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 SNORA25B-201ENST00000365507 128 ntBASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 RNU5A-2P-201ENST00000384337 116 ntBASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 AL591034.2-201ENST00000402839 359 ntBASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 MIR1323-201ENST00000408090 73 ntBASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 POLHP1-201ENST00000411806 470 ntBASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 RPS20P15-201ENST00000412792 311 ntBASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 MTND1P22-201ENST00000510572 951 ntBASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 AC091965.2-201ENST00000512324 613 ntBASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 SNORA4.4-201ENST00000515921 135 ntBASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 RNU2-53P-201ENST00000516257 147 ntBASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 AC233702.2-202ENST00000562547 291 ntBASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 AL121992.2-201ENST00000606262 256 ntBASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 uc_338.15-201ENST00000615470 191 ntBASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 AF246928.1-201ENST00000623768 87 ntBASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 AC027514.1-201ENST00000588561 1603 ntBASIC1.91□□□□□ -2.1
RPAP1Q9BWH6 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 RNU6-529P-201ENST00000363383 104 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 RNU4-13P-201ENST00000364019 141 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 Y_RNA.327-201ENST00000365201 102 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 RNU6-487P-201ENST00000365430 104 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 RNU6-622P-201ENST00000384272 103 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 SNORD116-20-201ENST00000384529 92 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 MIR186-201ENST00000384988 86 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 RPS3AP3-201ENST00000411933 242 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 RPL21P90-201ENST00000415692 466 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms