Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 RNU6-4P-201ENST00000384205 107 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RNU6-5P-201ENST00000384238 107 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RNU6-3P-201ENST00000384314 107 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RNU6-16P-201ENST00000384385 107 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RNU6-15P-201ENST00000384534 107 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RNU6-2-201ENST00000384627 107 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RNU6-29P-201ENST00000384637 107 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RNU6-9-201ENST00000384776 107 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RNU6-33P-201ENST00000384793 107 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 SNORD56-201ENST00000413522 71 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 TIMM9P3-201ENST00000428659 274 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.7□□□□□ -1.98
SDF4Q9BRK5 AL161788.1-201ENST00000441805 169 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 AC007969.2-201ENST00000441891 191 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RNU6-261P-201ENST00000459506 102 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RPL9P6-201ENST00000492764 598 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RPL23AP49-201ENST00000492925 468 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RPL37P25-201ENST00000507308 276 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 AC026436.1-201ENST00000510537 270 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.7□□□□□ -1.98
SDF4Q9BRK5 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.7□□□□□ -1.98
SDF4Q9BRK5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RNU2-53P-201ENST00000516257 147 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.7□□□□□ -1.98
SDF4Q9BRK5 AP001893.2-201ENST00000526949 202 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 CBX3P7-201ENST00000532876 502 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RPL30P11-203ENST00000598995 310 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RNU6-6P-201ENST00000606623 107 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 AC103810.6-201ENST00000606708 136 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 Z82243.1-201ENST00000609432 473 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 uc_338.34-201ENST00000617467 174 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 AC007792.1-201ENST00000623023 402 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 AC064859.1-201ENST00000624741 174 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.7□□□□□ -1.98
SDF4Q9BRK5 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.7□□□□□ -1.98
SDF4Q9BRK5 AC016717.2-201ENST00000609089 5141 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RNU4-40P-201ENST00000364351 143 ntBASIC2.69□□□□□ -1.98
SDF4Q9BRK5 Y_RNA.381-201ENST00000365666 102 ntBASIC2.69□□□□□ -1.98
SDF4Q9BRK5 RNU1-52P-201ENST00000384190 164 ntBASIC2.69□□□□□ -1.98
SDF4Q9BRK5 MTCO3P40-201ENST00000392516 676 ntBASIC2.69□□□□□ -1.98
SDF4Q9BRK5 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.69□□□□□ -1.98
SDF4Q9BRK5 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.69□□□□□ -1.98
SDF4Q9BRK5 AL591043.1-201ENST00000432461 424 ntBASIC2.69□□□□□ -1.98
SDF4Q9BRK5 TRBV12-1-201ENST00000479785 344 ntBASIC2.69□□□□□ -1.98
SDF4Q9BRK5 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.69□□□□□ -1.98
SDF4Q9BRK5 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.69□□□□□ -1.98
SDF4Q9BRK5 RNU1-104P-201ENST00000517280 175 ntBASIC2.69□□□□□ -1.98
SDF4Q9BRK5 COPS8P3-201ENST00000526024 482 ntBASIC2.69□□□□□ -1.98
SDF4Q9BRK5 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.69□□□□□ -1.98
SDF4Q9BRK5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.69□□□□□ -1.98
SDF4Q9BRK5 MIR5583-1-201ENST00000580941 59 ntBASIC2.69□□□□□ -1.98
SDF4Q9BRK5 AC103987.3-201ENST00000582071 292 ntBASIC2.69□□□□□ -1.98
SDF4Q9BRK5 AC002044.1-201ENST00000606707 158 ntBASIC2.69□□□□□ -1.98
SDF4Q9BRK5 AC046143.2-201ENST00000609789 160 ntBASIC2.69□□□□□ -1.98
SDF4Q9BRK5 U2.17-201ENST00000611454 95 ntBASIC2.69□□□□□ -1.98
SDF4Q9BRK5 AL159153.1-201ENST00000619688 317 ntBASIC2.69□□□□□ -1.98
SDF4Q9BRK5 AC068792.1-201ENST00000621354 417 ntBASIC2.69□□□□□ -1.98
SDF4Q9BRK5 AL359880.1-201ENST00000621879 266 ntBASIC2.69□□□□□ -1.98
SDF4Q9BRK5 AC002543.1-201ENST00000299783 1954 ntBASIC2.69□□□□□ -1.98
SDF4Q9BRK5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SDF4Q9BRK5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SDF4Q9BRK5 RNU6-527P-201ENST00000363425 104 ntBASIC2.68□□□□□ -1.98
SDF4Q9BRK5 RNU6-105P-201ENST00000363909 104 ntBASIC2.68□□□□□ -1.98
SDF4Q9BRK5 RNU6-266P-201ENST00000364225 107 ntBASIC2.68□□□□□ -1.98
SDF4Q9BRK5 AL606923.1-201ENST00000406616 190 ntBASIC2.68□□□□□ -1.98
SDF4Q9BRK5 SUMO1P4-201ENST00000429430 302 ntBASIC2.68□□□□□ -1.98
SDF4Q9BRK5 AC013470.1-201ENST00000453438 462 ntBASIC2.68□□□□□ -1.98
SDF4Q9BRK5 SRRM1P2-201ENST00000464531 1192 ntBASIC2.68□□□□□ -1.98
SDF4Q9BRK5 CKS1BP2-201ENST00000497342 240 ntBASIC2.68□□□□□ -1.98
SDF4Q9BRK5 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.68□□□□□ -1.98
SDF4Q9BRK5 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.68□□□□□ -1.98
SDF4Q9BRK5 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.68□□□□□ -1.98
SDF4Q9BRK5 RNU6-377P-201ENST00000515965 102 ntBASIC2.68□□□□□ -1.98
SDF4Q9BRK5 AC022880.1-201ENST00000534017 973 ntBASIC2.68□□□□□ -1.98
SDF4Q9BRK5 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.68□□□□□ -1.98
SDF4Q9BRK5 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.68□□□□□ -1.98
SDF4Q9BRK5 MIR4446-201ENST00000578505 67 ntBASIC2.68□□□□□ -1.98
SDF4Q9BRK5 AL136363.2-201ENST00000604173 851 ntBASIC2.68□□□□□ -1.98
SDF4Q9BRK5 AL049779.4-201ENST00000604500 156 ntBASIC2.68□□□□□ -1.98
SDF4Q9BRK5 APOOP1-201ENST00000604695 592 ntBASIC2.68□□□□□ -1.98
SDF4Q9BRK5 AL355297.2-201ENST00000604792 129 ntBASIC2.68□□□□□ -1.98
SDF4Q9BRK5 AC093783.1-201ENST00000612976 329 ntBASIC2.68□□□□□ -1.98
SDF4Q9BRK5 AC008121.3-201ENST00000618726 433 ntBASIC2.68□□□□□ -1.98
SDF4Q9BRK5 FO624990.1-201ENST00000636373 85 ntBASIC2.68□□□□□ -1.98
SDF4Q9BRK5 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SDF4Q9BRK5 RNU6-655P-201ENST00000362858 107 ntBASIC2.67□□□□□ -1.98
SDF4Q9BRK5 RNU6-1210P-201ENST00000363775 107 ntBASIC2.67□□□□□ -1.98
SDF4Q9BRK5 Y_RNA.409-201ENST00000383990 98 ntBASIC2.67□□□□□ -1.98
SDF4Q9BRK5 RNU1-138P-201ENST00000384093 164 ntBASIC2.67□□□□□ -1.98
SDF4Q9BRK5 AC016907.1-201ENST00000419483 435 ntBASIC2.67□□□□□ -1.98
SDF4Q9BRK5 RPL7P54-201ENST00000438336 674 ntBASIC2.67□□□□□ -1.98
SDF4Q9BRK5 PSPHP1-201ENST00000450062 261 ntBASIC2.67□□□□□ -1.98
SDF4Q9BRK5 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.67□□□□□ -1.98
SDF4Q9BRK5 SNORA48.11-201ENST00000517015 89 ntBASIC2.67□□□□□ -1.98
SDF4Q9BRK5 AC069113.1-201ENST00000517763 267 ntBASIC2.67□□□□□ -1.98
SDF4Q9BRK5 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.67□□□□□ -1.98
SDF4Q9BRK5 AC090115.3-201ENST00000553218 849 ntBASIC2.67□□□□□ -1.98
SDF4Q9BRK5 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms