Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC004941.2-201ENST00000427009 228 ntBASIC0.5□□□□□ -2.33
AP1S3Q96PC3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.5□□□□□ -2.33
AP1S3Q96PC3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.5□□□□□ -2.33
AP1S3Q96PC3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.5□□□□□ -2.33
AP1S3Q96PC3 AC092473.1-201ENST00000441098 221 ntBASIC0.5□□□□□ -2.33
AP1S3Q96PC3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.5□□□□□ -2.33
AP1S3Q96PC3 RNU6-333P-201ENST00000459117 107 ntBASIC0.5□□□□□ -2.33
AP1S3Q96PC3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.5□□□□□ -2.33
AP1S3Q96PC3 AC117454.1-201ENST00000491120 168 ntBASIC0.5□□□□□ -2.33
AP1S3Q96PC3 RNA5SP503-201ENST00000517047 117 ntBASIC0.5□□□□□ -2.33
AP1S3Q96PC3 RNU6-165P-201ENST00000517170 99 ntBASIC0.5□□□□□ -2.33
AP1S3Q96PC3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.5□□□□□ -2.33
AP1S3Q96PC3 CR383656.8-201ENST00000549046 145 ntBASIC0.5□□□□□ -2.33
AP1S3Q96PC3 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
AP1S3Q96PC3 AC015712.3-201ENST00000559380 164 ntBASIC0.5□□□□□ -2.33
AP1S3Q96PC3 AL159153.1-201ENST00000619688 317 ntBASIC0.5□□□□□ -2.33
AP1S3Q96PC3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
AP1S3Q96PC3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
AP1S3Q96PC3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
AP1S3Q96PC3 RNU6-212P-201ENST00000362642 104 ntBASIC0.49□□□□□ -2.33
AP1S3Q96PC3 RNU6-853P-201ENST00000364306 107 ntBASIC0.49□□□□□ -2.33
AP1S3Q96PC3 MTCO1P56-201ENST00000401674 224 ntBASIC0.49□□□□□ -2.33
AP1S3Q96PC3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.49□□□□□ -2.33
AP1S3Q96PC3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.49□□□□□ -2.33
AP1S3Q96PC3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.49□□□□□ -2.33
AP1S3Q96PC3 AC083875.1-201ENST00000419509 405 ntBASIC0.49□□□□□ -2.33
AP1S3Q96PC3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.49□□□□□ -2.33
AP1S3Q96PC3 CBX3P6-201ENST00000430257 527 ntBASIC0.49□□□□□ -2.33
AP1S3Q96PC3 NEFMP1-201ENST00000443423 1006 ntBASIC0.49□□□□□ -2.33
AP1S3Q96PC3 snoU13.30-201ENST00000458951 104 ntBASIC0.49□□□□□ -2.33
AP1S3Q96PC3 SNORD124-201ENST00000459577 104 ntBASIC0.49□□□□□ -2.33
AP1S3Q96PC3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.49□□□□□ -2.33
AP1S3Q96PC3 RNU6-113P-201ENST00000516653 101 ntBASIC0.49□□□□□ -2.33
AP1S3Q96PC3 RNU6-143P-201ENST00000516942 93 ntBASIC0.49□□□□□ -2.33
AP1S3Q96PC3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.49□□□□□ -2.33
AP1S3Q96PC3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.49□□□□□ -2.33
AP1S3Q96PC3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.49□□□□□ -2.33
AP1S3Q96PC3 AC021451.1-201ENST00000523498 1129 ntBASIC0.49□□□□□ -2.33
AP1S3Q96PC3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.49□□□□□ -2.33
AP1S3Q96PC3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.49□□□□□ -2.33
AP1S3Q96PC3 AC022022.2-201ENST00000602989 360 ntBASIC0.49□□□□□ -2.33
AP1S3Q96PC3 AP000942.3-201ENST00000603702 160 ntBASIC0.49□□□□□ -2.33
AP1S3Q96PC3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.49□□□□□ -2.33
AP1S3Q96PC3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.49□□□□□ -2.33
AP1S3Q96PC3 SNORD18A-201ENST00000363753 72 ntBASIC0.48□□□□□ -2.33
AP1S3Q96PC3 SNORA18.2-201ENST00000383865 132 ntBASIC0.48□□□□□ -2.33
AP1S3Q96PC3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.48□□□□□ -2.33
AP1S3Q96PC3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.48□□□□□ -2.33
AP1S3Q96PC3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.48□□□□□ -2.33
AP1S3Q96PC3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.48□□□□□ -2.33
AP1S3Q96PC3 CALM1P1-201ENST00000442082 433 ntBASIC0.48□□□□□ -2.33
AP1S3Q96PC3 EEF1E1P1-201ENST00000446998 430 ntBASIC0.48□□□□□ -2.33
AP1S3Q96PC3 AL583843.1-201ENST00000456070 346 ntBASIC0.48□□□□□ -2.33
AP1S3Q96PC3 RNU7-59P-201ENST00000459101 61 ntBASIC0.48□□□□□ -2.33
AP1S3Q96PC3 HMGB1P30-201ENST00000492455 606 ntBASIC0.48□□□□□ -2.33
AP1S3Q96PC3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
AP1S3Q96PC3 RNU6-751P-201ENST00000516382 101 ntBASIC0.48□□□□□ -2.33
AP1S3Q96PC3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.48□□□□□ -2.33
AP1S3Q96PC3 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.48□□□□□ -2.33
AP1S3Q96PC3 MTND1P36-201ENST00000522384 936 ntBASIC0.48□□□□□ -2.33
AP1S3Q96PC3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.48□□□□□ -2.33
AP1S3Q96PC3 AL590229.1-201ENST00000603497 542 ntBASIC0.48□□□□□ -2.33
AP1S3Q96PC3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.48□□□□□ -2.33
AP1S3Q96PC3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.48□□□□□ -2.33
AP1S3Q96PC3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.48□□□□□ -2.33
AP1S3Q96PC3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
AP1S3Q96PC3 SNORD3E-201ENST00000362899 217 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
AP1S3Q96PC3 MIR222-201ENST00000384992 110 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 MIR23A-201ENST00000385245 73 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 SNORA12-201ENST00000391162 147 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 FGF7P8-201ENST00000402994 292 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 EBAG9P1-201ENST00000418955 543 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.47□□□□□ -2.33
AP1S3Q96PC3 TXNL1P1-201ENST00000429528 554 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 MTCO2P25-201ENST00000447065 681 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 AP000542.1-201ENST00000448473 371 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 ZNF886P-201ENST00000450781 723 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 TPRKBP1-201ENST00000456243 481 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 PDCD5P2-201ENST00000507570 312 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 AC024589.1-201ENST00000512207 263 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 RNU5A-4P-201ENST00000516588 111 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 RNU6-1315P-201ENST00000517187 99 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.47□□□□□ -2.33
AP1S3Q96PC3 MIR3973-201ENST00000579824 107 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 AC008751.2-201ENST00000597885 980 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 AL590095.2-201ENST00000604136 117 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 BNIP3P31-201ENST00000604515 566 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 AL365204.3-201ENST00000612448 685 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 RMST_4.1-201ENST00000616886 107 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 AC104985.3-201ENST00000623479 597 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.47□□□□□ -2.33
AP1S3Q96PC3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
AP1S3Q96PC3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.47□□□□□ -2.33
AP1S3Q96PC3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.47□□□□□ -2.33
AP1S3Q96PC3 AC010615.1-201ENST00000594254 1764 ntBASIC0.47□□□□□ -2.33
AP1S3Q96PC3 RNU6-1284P-201ENST00000363701 100 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 SNORD114-24-201ENST00000365029 72 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 RNU6-72P-201ENST00000384285 79 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 SNORD116-20-201ENST00000384529 92 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms