Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 CBX3P8-201ENST00000532412 525 ntBASIC3.23□□□□□ -1.89
SLC46A1Q96NT5 AC006199.1-201ENST00000548728 219 ntBASIC3.23□□□□□ -1.89
SLC46A1Q96NT5 CR383656.8-201ENST00000549046 145 ntBASIC3.23□□□□□ -1.89
SLC46A1Q96NT5 SUB1P3-201ENST00000564581 315 ntBASIC3.23□□□□□ -1.89
SLC46A1Q96NT5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC46A1Q96NT5 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC46A1Q96NT5 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.23□□□□□ -1.89
SLC46A1Q96NT5 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.23□□□□□ -1.89
SLC46A1Q96NT5 AC006386.2-201ENST00000624491 75 ntBASIC3.23□□□□□ -1.89
SLC46A1Q96NT5 AC012005.1-201ENST00000624575 75 ntBASIC3.23□□□□□ -1.89
SLC46A1Q96NT5 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SLC46A1Q96NT5 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
SLC46A1Q96NT5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SLC46A1Q96NT5 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 Y_RNA.148-201ENST00000363557 117 ntBASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 SNORA63C-201ENST00000364578 129 ntBASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 RNU6-1280P-201ENST00000365211 107 ntBASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 Y_RNA.496-201ENST00000384444 101 ntBASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 AL357075.1-201ENST00000404107 726 ntBASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 FTH1P15-201ENST00000406984 280 ntBASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 MCFD2P1-201ENST00000417812 300 ntBASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 HMGN2P20-201ENST00000437531 273 ntBASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 AC124916.1-201ENST00000444020 547 ntBASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 RNU7-23P-201ENST00000459465 62 ntBASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 MRPL42P6-201ENST00000486397 371 ntBASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 AC116655.1-201ENST00000508324 901 ntBASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 RNU6-581P-201ENST00000516214 105 ntBASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 AC005014.2-201ENST00000607795 599 ntBASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SLC46A1Q96NT5 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SLC46A1Q96NT5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 Y_RNA.48-201ENST00000362710 103 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 SNORA80A-201ENST00000363922 136 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 AC117470.1-201ENST00000381974 330 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 RNU6-639P-201ENST00000384074 107 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 RNU6-1032P-201ENST00000384100 107 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 SNORD116-20-201ENST00000384529 92 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 RNU6-1077P-201ENST00000410506 102 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 AP000275.1-201ENST00000411943 390 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 AC008267.5-201ENST00000424928 265 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 AL591043.1-201ENST00000432461 424 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 NIPA2P5-201ENST00000452282 464 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 RPL23AP67-201ENST00000465341 474 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 AP002884.2-201ENST00000471647 395 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 RPL17P19-201ENST00000489069 552 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 SNORA31.1-201ENST00000515993 133 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 Y_RNA.661-201ENST00000516003 99 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 SNORA31.5-201ENST00000516190 133 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 RNU6-1045P-201ENST00000516321 107 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 MIR5696-201ENST00000578474 85 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 AL158827.2-201ENST00000602494 330 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 AC116312.1-201ENST00000606841 314 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 AC083806.3-201ENST00000614016 455 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 AL691447.3-201ENST00000635020 330 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 MIR3199-2-201ENST00000636243 86 ntBASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC46A1Q96NT5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 MIR422A-201ENST00000362286 90 ntBASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 SNORD50.1-201ENST00000362987 71 ntBASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 Y_RNA.428-201ENST00000384078 102 ntBASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 RNU6-784P-201ENST00000384330 106 ntBASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 RNY1P14-201ENST00000384426 108 ntBASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 Y_RNA.533-201ENST00000384596 114 ntBASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 RNA5SP252-201ENST00000391131 119 ntBASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 AC023141.4-201ENST00000412031 328 ntBASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 HMGN1P10-201ENST00000474557 553 ntBASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 SNORD116.3-201ENST00000517176 78 ntBASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 AP001836.1-201ENST00000604675 523 ntBASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 AC009318.2-201ENST00000610917 651 ntBASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 RNVU1-4-201ENST00000612985 164 ntBASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 AC097372.5-201ENST00000623665 376 ntBASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 SNORA50A-202ENST00000629536 136 ntBASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 AC241585.2-209ENST00000638217 143 ntBASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 ZNF299P-201ENST00000406845 1804 ntBASIC3.2□□□□□ -1.9
SLC46A1Q96NT5 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms