Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 AC009518.2-201ENST00000418056 731 ntBASIC0.58□□□□□ -2.32
CCDC115Q96NT0 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.58□□□□□ -2.32
CCDC115Q96NT0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.58□□□□□ -2.32
CCDC115Q96NT0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.58□□□□□ -2.32
CCDC115Q96NT0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.58□□□□□ -2.32
CCDC115Q96NT0 RPS27AP8-201ENST00000452665 445 ntBASIC0.58□□□□□ -2.32
CCDC115Q96NT0 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.58□□□□□ -2.32
CCDC115Q96NT0 RPL39P36-201ENST00000490784 156 ntBASIC0.58□□□□□ -2.32
CCDC115Q96NT0 TRBVA-201ENST00000498804 316 ntBASIC0.58□□□□□ -2.32
CCDC115Q96NT0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.58□□□□□ -2.32
CCDC115Q96NT0 RNA5SP481-201ENST00000516814 122 ntBASIC0.58□□□□□ -2.32
CCDC115Q96NT0 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.58□□□□□ -2.32
CCDC115Q96NT0 DEFB108E-201ENST00000524692 240 ntBASIC0.58□□□□□ -2.32
CCDC115Q96NT0 MTCO2P2-201ENST00000591258 225 ntBASIC0.58□□□□□ -2.32
CCDC115Q96NT0 AC022022.2-201ENST00000602989 360 ntBASIC0.58□□□□□ -2.32
CCDC115Q96NT0 BNIP3P31-201ENST00000604515 566 ntBASIC0.58□□□□□ -2.32
CCDC115Q96NT0 AP000654.2-201ENST00000605633 586 ntBASIC0.58□□□□□ -2.32
CCDC115Q96NT0 RMST_4.1-201ENST00000616886 107 ntBASIC0.58□□□□□ -2.32
CCDC115Q96NT0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.58□□□□□ -2.32
CCDC115Q96NT0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.57□□□□□ -2.32
CCDC115Q96NT0 RNU6-622P-201ENST00000384272 103 ntBASIC0.57□□□□□ -2.32
CCDC115Q96NT0 MIR508-201ENST00000384857 115 ntBASIC0.57□□□□□ -2.32
CCDC115Q96NT0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.57□□□□□ -2.32
CCDC115Q96NT0 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.57□□□□□ -2.32
CCDC115Q96NT0 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.57□□□□□ -2.32
CCDC115Q96NT0 TIMM9P1-201ENST00000436122 256 ntBASIC0.57□□□□□ -2.32
CCDC115Q96NT0 AC097473.1-201ENST00000508142 408 ntBASIC0.57□□□□□ -2.32
CCDC115Q96NT0 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.57□□□□□ -2.32
CCDC115Q96NT0 RNA5SP384-201ENST00000516615 116 ntBASIC0.57□□□□□ -2.32
CCDC115Q96NT0 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CCDC115Q96NT0 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.57□□□□□ -2.32
CCDC115Q96NT0 ZNF92P2-201ENST00000600543 1059 ntBASIC0.57□□□□□ -2.32
CCDC115Q96NT0 AC245060.5-201ENST00000610778 3293 ntBASIC0.56□□□□□ -2.32
CCDC115Q96NT0 Y_RNA.40-201ENST00000362645 93 ntBASIC0.56□□□□□ -2.32
CCDC115Q96NT0 Y_RNA.238-201ENST00000364441 102 ntBASIC0.56□□□□□ -2.32
CCDC115Q96NT0 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
CCDC115Q96NT0 MIR548B-201ENST00000385247 97 ntBASIC0.56□□□□□ -2.32
CCDC115Q96NT0 MIR301A-201ENST00000385261 86 ntBASIC0.56□□□□□ -2.32
CCDC115Q96NT0 Y_RNA.597-201ENST00000410463 100 ntBASIC0.56□□□□□ -2.32
CCDC115Q96NT0 RNU2-7P-201ENST00000410794 178 ntBASIC0.56□□□□□ -2.32
CCDC115Q96NT0 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.56□□□□□ -2.32
CCDC115Q96NT0 MTCO1P3-201ENST00000429327 192 ntBASIC0.56□□□□□ -2.32
CCDC115Q96NT0 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.56□□□□□ -2.32
CCDC115Q96NT0 MTND5P14-201ENST00000441481 1267 ntBASIC0.56□□□□□ -2.32
CCDC115Q96NT0 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.56□□□□□ -2.32
CCDC115Q96NT0 AC003071.1-201ENST00000451219 789 ntBASIC0.56□□□□□ -2.32
CCDC115Q96NT0 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.56□□□□□ -2.32
CCDC115Q96NT0 AL353752.1-201ENST00000454946 260 ntBASIC0.56□□□□□ -2.32
CCDC115Q96NT0 AC026414.1-201ENST00000504046 698 ntBASIC0.56□□□□□ -2.32
CCDC115Q96NT0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.56□□□□□ -2.32
CCDC115Q96NT0 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.56□□□□□ -2.32
CCDC115Q96NT0 RNA5SP503-201ENST00000517047 117 ntBASIC0.56□□□□□ -2.32
CCDC115Q96NT0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.56□□□□□ -2.32
CCDC115Q96NT0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.56□□□□□ -2.32
CCDC115Q96NT0 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.56□□□□□ -2.32
CCDC115Q96NT0 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.56□□□□□ -2.32
CCDC115Q96NT0 AC004812.1-201ENST00000540773 146 ntBASIC0.56□□□□□ -2.32
CCDC115Q96NT0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.56□□□□□ -2.32
CCDC115Q96NT0 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
CCDC115Q96NT0 RNU6-166P-201ENST00000384371 107 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 MIR608-201ENST00000384820 100 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
CCDC115Q96NT0 RPL21P1-201ENST00000399532 476 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 RNU2-42P-201ENST00000410697 113 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.55□□□□□ -2.32
CCDC115Q96NT0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.55□□□□□ -2.32
CCDC115Q96NT0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.55□□□□□ -2.32
CCDC115Q96NT0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.55□□□□□ -2.32
CCDC115Q96NT0 MTND1P31-201ENST00000449206 961 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 HMGB1P30-201ENST00000492455 606 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
CCDC115Q96NT0 RNU6-322P-201ENST00000516010 103 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 RNU5A-4P-201ENST00000516588 111 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 RNU6-197P-201ENST00000516680 100 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 SNORD60.2-201ENST00000516883 86 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 RNA5SP490-201ENST00000517141 136 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.55□□□□□ -2.32
CCDC115Q96NT0 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.55□□□□□ -2.32
CCDC115Q96NT0 CR383656.8-201ENST00000549046 145 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.55□□□□□ -2.32
CCDC115Q96NT0 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.55□□□□□ -2.32
CCDC115Q96NT0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.55□□□□□ -2.32
CCDC115Q96NT0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.55□□□□□ -2.32
CCDC115Q96NT0 MIR3664-201ENST00000579074 99 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 MTATP6P3-201ENST00000581686 676 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 AC078795.2-201ENST00000602835 1252 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 AL078603.1-201ENST00000603824 313 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 AC090578.1-201ENST00000604955 591 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 AL365434.2-201ENST00000607979 234 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.55□□□□□ -2.32
CCDC115Q96NT0 MIR6788-201ENST00000618842 66 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.55□□□□□ -2.32
CCDC115Q96NT0 AP000676.3-201ENST00000623299 569 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.55□□□□□ -2.32
CCDC115Q96NT0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
CCDC115Q96NT0 AC027514.1-201ENST00000588561 1603 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 MTND4P21-201ENST00000453886 1357 ntBASIC0.55□□□□□ -2.32
CCDC115Q96NT0 snoU2_19.1-201ENST00000362361 80 ntBASIC0.54□□□□□ -2.32
CCDC115Q96NT0 MIR1287-201ENST00000408492 90 ntBASIC0.54□□□□□ -2.32
CCDC115Q96NT0 MIR548J-201ENST00000408833 112 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms