Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AL138878.1-201ENST00000405131 347 ntBASIC4.6□□□□□ -1.67
CALR3Q96L12 SNORA11.3-201ENST00000408471 128 ntBASIC4.6□□□□□ -1.67
CALR3Q96L12 MIR1298-201ENST00000408783 112 ntBASIC4.6□□□□□ -1.67
CALR3Q96L12 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.6□□□□□ -1.67
CALR3Q96L12 AL365496.1-201ENST00000426885 215 ntBASIC4.6□□□□□ -1.67
CALR3Q96L12 AL031183.1-201ENST00000457667 207 ntBASIC4.6□□□□□ -1.67
CALR3Q96L12 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.6□□□□□ -1.67
CALR3Q96L12 AC008749.1-201ENST00000597650 306 ntBASIC4.6□□□□□ -1.67
CALR3Q96L12 SNORA11.6-201ENST00000619030 128 ntBASIC4.6□□□□□ -1.67
CALR3Q96L12 AP005019.3-201ENST00000620418 560 ntBASIC4.6□□□□□ -1.67
CALR3Q96L12 AC006001.4-201ENST00000622243 395 ntBASIC4.6□□□□□ -1.67
CALR3Q96L12 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.6□□□□□ -1.67
CALR3Q96L12 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CALR3Q96L12 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CALR3Q96L12 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CALR3Q96L12 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CALR3Q96L12 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.59□□□□□ -1.67
CALR3Q96L12 FAM35DP-201ENST00000323387 2712 ntBASIC4.59□□□□□ -1.67
CALR3Q96L12 SNORA25.1-201ENST00000362326 128 ntBASIC4.59□□□□□ -1.67
CALR3Q96L12 RNA5SP197-201ENST00000363357 119 ntBASIC4.59□□□□□ -1.67
CALR3Q96L12 Y_RNA.331-201ENST00000365267 102 ntBASIC4.59□□□□□ -1.67
CALR3Q96L12 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CALR3Q96L12 SNORA70F-201ENST00000384142 135 ntBASIC4.59□□□□□ -1.67
CALR3Q96L12 SNORD66.1-201ENST00000391230 76 ntBASIC4.59□□□□□ -1.67
CALR3Q96L12 AL512633.1-201ENST00000399931 655 ntBASIC4.59□□□□□ -1.67
CALR3Q96L12 SPTLC1P2-201ENST00000407089 121 ntBASIC4.59□□□□□ -1.67
CALR3Q96L12 MIR1179-201ENST00000408703 91 ntBASIC4.59□□□□□ -1.67
CALR3Q96L12 AIMP1P2-201ENST00000425294 312 ntBASIC4.59□□□□□ -1.67
CALR3Q96L12 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.59□□□□□ -1.67
CALR3Q96L12 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.59□□□□□ -1.67
CALR3Q96L12 AL138752.1-201ENST00000452964 351 ntBASIC4.59□□□□□ -1.67
CALR3Q96L12 RNU6-625P-201ENST00000459412 107 ntBASIC4.59□□□□□ -1.67
CALR3Q96L12 AP001324.2-201ENST00000461163 319 ntBASIC4.59□□□□□ -1.67
CALR3Q96L12 RN7SL329P-201ENST00000467740 299 ntBASIC4.59□□□□□ -1.67
CALR3Q96L12 AC006064.5-201ENST00000541782 248 ntBASIC4.59□□□□□ -1.67
CALR3Q96L12 AC018448.1-201ENST00000552843 316 ntBASIC4.59□□□□□ -1.67
CALR3Q96L12 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.59□□□□□ -1.67
CALR3Q96L12 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.59□□□□□ -1.67
CALR3Q96L12 MIR3934-201ENST00000579806 107 ntBASIC4.59□□□□□ -1.67
CALR3Q96L12 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CALR3Q96L12 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.59□□□□□ -1.67
CALR3Q96L12 IGHVIII-44-202ENST00000636235 289 ntBASIC4.59□□□□□ -1.67
CALR3Q96L12 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.59□□□□□ -1.67
CALR3Q96L12 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CALR3Q96L12 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CALR3Q96L12 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CALR3Q96L12 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
CALR3Q96L12 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CALR3Q96L12 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CALR3Q96L12 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CALR3Q96L12 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
CALR3Q96L12 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CALR3Q96L12 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CALR3Q96L12 RNU1-62P-201ENST00000362599 164 ntBASIC4.58□□□□□ -1.68
CALR3Q96L12 RNA5SP175-201ENST00000364275 119 ntBASIC4.58□□□□□ -1.68
CALR3Q96L12 RNU6-514P-201ENST00000384208 107 ntBASIC4.58□□□□□ -1.68
CALR3Q96L12 RNU6-378P-201ENST00000384324 107 ntBASIC4.58□□□□□ -1.68
CALR3Q96L12 SNORA11F-201ENST00000408237 128 ntBASIC4.58□□□□□ -1.68
CALR3Q96L12 RN7SKP229-201ENST00000410465 302 ntBASIC4.58□□□□□ -1.68
CALR3Q96L12 SETP5-201ENST00000437270 562 ntBASIC4.58□□□□□ -1.68
CALR3Q96L12 PRELID3BP1-201ENST00000457142 540 ntBASIC4.58□□□□□ -1.68
CALR3Q96L12 AC091179.3-201ENST00000474761 144 ntBASIC4.58□□□□□ -1.68
CALR3Q96L12 AC006517.1-201ENST00000480485 328 ntBASIC4.58□□□□□ -1.68
CALR3Q96L12 AC103975.1-201ENST00000482506 483 ntBASIC4.58□□□□□ -1.68
CALR3Q96L12 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.58□□□□□ -1.68
CALR3Q96L12 PCGEM1.1-201ENST00000613431 131 ntBASIC4.58□□□□□ -1.68
CALR3Q96L12 MIR7155-201ENST00000615925 56 ntBASIC4.58□□□□□ -1.68
CALR3Q96L12 AL391261.4-201ENST00000616012 481 ntBASIC4.58□□□□□ -1.68
CALR3Q96L12 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CALR3Q96L12 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.58□□□□□ -1.68
CALR3Q96L12 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CALR3Q96L12 Y_RNA.83-201ENST00000363005 113 ntBASIC4.57□□□□□ -1.68
CALR3Q96L12 SNORA72.2-201ENST00000365028 127 ntBASIC4.57□□□□□ -1.68
CALR3Q96L12 SNORA18.3-201ENST00000384122 132 ntBASIC4.57□□□□□ -1.68
CALR3Q96L12 Y_RNA.498-201ENST00000384460 102 ntBASIC4.57□□□□□ -1.68
CALR3Q96L12 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CALR3Q96L12 Z98941.1-201ENST00000407764 100 ntBASIC4.57□□□□□ -1.68
CALR3Q96L12 RNA5SP201-201ENST00000410316 124 ntBASIC4.57□□□□□ -1.68
CALR3Q96L12 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.57□□□□□ -1.68
CALR3Q96L12 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.57□□□□□ -1.68
CALR3Q96L12 RPL23AP81-201ENST00000455252 467 ntBASIC4.57□□□□□ -1.68
CALR3Q96L12 RPL7P47-201ENST00000497299 556 ntBASIC4.57□□□□□ -1.68
CALR3Q96L12 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.57□□□□□ -1.68
CALR3Q96L12 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.57□□□□□ -1.68
CALR3Q96L12 KLKP1-201ENST00000595979 403 ntBASIC4.57□□□□□ -1.68
CALR3Q96L12 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.57□□□□□ -1.68
CALR3Q96L12 AC022441.3-201ENST00000605737 136 ntBASIC4.57□□□□□ -1.68
CALR3Q96L12 uc_338.14-201ENST00000613162 166 ntBASIC4.57□□□□□ -1.68
CALR3Q96L12 AC004792.1-201ENST00000614523 137 ntBASIC4.57□□□□□ -1.68
CALR3Q96L12 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.57□□□□□ -1.68
CALR3Q96L12 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.57□□□□□ -1.68
CALR3Q96L12 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CALR3Q96L12 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CALR3Q96L12 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CALR3Q96L12 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CALR3Q96L12 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CALR3Q96L12 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.56□□□□□ -1.68
CALR3Q96L12 MIR410-201ENST00000362222 80 ntBASIC4.56□□□□□ -1.68
CALR3Q96L12 RNU6-213P-201ENST00000384051 104 ntBASIC4.56□□□□□ -1.68
CALR3Q96L12 Y_RNA.555-201ENST00000384673 110 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms