Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 RN7SKP219-201ENST00000516825 296 ntBASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 AC118273.2-201ENST00000532092 465 ntBASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 AL137161.1-201ENST00000532231 390 ntBASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 AC093249.1-201ENST00000567049 203 ntBASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 AC078795.2-201ENST00000602835 1252 ntBASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 AL713866.2-201ENST00000603579 219 ntBASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 AC017083.3-201ENST00000609955 700 ntBASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 AC097372.5-201ENST00000623665 376 ntBASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 AC068137.4-201ENST00000638485 296 ntBASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 AL355596.1-201ENST00000565399 3996 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 RNU1-72P-201ENST00000362976 153 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 RNU6-529P-201ENST00000363383 104 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 RNU6-1210P-201ENST00000363775 107 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 RNU6-903P-201ENST00000391270 109 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 AL359511.1-201ENST00000402970 211 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 AL606923.1-201ENST00000406616 190 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 RNA5SP270-201ENST00000411361 118 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 MTCO3P41-201ENST00000414801 328 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 AL353193.1-201ENST00000421444 268 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 AL356320.1-201ENST00000429616 163 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 RPL9P33-201ENST00000484311 566 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 AC068781.1-201ENST00000488231 618 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 MTCYBP40-201ENST00000509390 1135 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 HMGB3P3-201ENST00000510526 400 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 AC109479.2-201ENST00000517842 174 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 AP005435.4-201ENST00000529514 284 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 AP003034.1-201ENST00000534621 422 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 HIF1AP1-201ENST00000553642 175 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 MIR3941-201ENST00000582572 103 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 AC073534.2-201ENST00000620377 381 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 ZNF271P-202ENST00000465539 1970 ntBASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
SNRNP40Q96DI7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 U3.13-201ENST00000364804 214 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 MIR544A-201ENST00000384855 91 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 SNORA16.2-201ENST00000390991 127 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 MIR1289-2-201ENST00000408360 111 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 AIMP1P2-201ENST00000425294 312 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 AL589823.1-201ENST00000429577 183 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 RPL39P29-201ENST00000447779 157 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 RPL23AP45-201ENST00000476406 468 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 AL163973.1-201ENST00000484753 577 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 RPL9P6-201ENST00000492764 598 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 AC234781.5-201ENST00000508429 271 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 CKS1BP7-201ENST00000522230 235 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 MTND4P7-201ENST00000523876 130 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 ELOCP31-201ENST00000540463 467 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 AC023050.3-201ENST00000541142 333 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 AC015712.3-201ENST00000559380 164 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 AC002044.1-201ENST00000606707 158 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 AP001330.5-201ENST00000607176 411 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 AL359198.2-201ENST00000611836 194 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 HULC.1-201ENST00000612720 240 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 OR5AK4P-201ENST00000635912 903 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 FO624990.1-201ENST00000636373 85 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 U4.7-201ENST00000638126 106 ntBASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SNRNP40Q96DI7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 Y_RNA.41-201ENST00000362646 102 ntBASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 RNU1-138P-201ENST00000384093 164 ntBASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 AL590556.1-201ENST00000423231 483 ntBASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 AL591806.2-201ENST00000433122 173 ntBASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 IFNA11P-201ENST00000446352 526 ntBASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 AL031274.1-201ENST00000450334 232 ntBASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 AL121594.1-201ENST00000475906 575 ntBASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 RN7SL297P-201ENST00000483161 293 ntBASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 AC107401.1-201ENST00000503426 685 ntBASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 AC091435.1-201ENST00000505442 584 ntBASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 SNORA48.11-201ENST00000517015 89 ntBASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.24□□□□□ -2.05
SNRNP40Q96DI7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms