Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 RNU6-6P-201ENST00000606623 107 ntBASIC1.96□□□□□ -2.1
LINC01006Q8NI28 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LINC01006Q8NI28 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.96□□□□□ -2.1
LINC01006Q8NI28 AC009248.2-201ENST00000619826 254 ntBASIC1.96□□□□□ -2.1
LINC01006Q8NI28 AC090617.7-201ENST00000623952 126 ntBASIC1.96□□□□□ -2.1
LINC01006Q8NI28 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
LINC01006Q8NI28 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LINC01006Q8NI28 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.95□□□□□ -2.1
LINC01006Q8NI28 RNU6-942P-201ENST00000363002 107 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 Y_RNA.88-201ENST00000363029 99 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 SNORD114-30-201ENST00000364448 72 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 Y_RNA.279-201ENST00000364763 95 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 U8.9-201ENST00000365667 134 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 MIR504-201ENST00000385065 83 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01006Q8NI28 RPL7P37-201ENST00000425095 738 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 MTCO3P18-201ENST00000440206 761 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 AL161651.1-201ENST00000440882 223 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01006Q8NI28 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01006Q8NI28 snoU13.15-201ENST00000459407 104 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01006Q8NI28 SEM1P1-201ENST00000506694 209 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01006Q8NI28 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.95□□□□□ -2.1
LINC01006Q8NI28 RNU4-49P-201ENST00000516080 140 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 RNU6-323P-201ENST00000521915 107 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 AP005597.4-201ENST00000526762 229 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.95□□□□□ -2.1
LINC01006Q8NI28 AC025423.5-201ENST00000550230 219 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 PSMA3P-201ENST00000555485 635 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01006Q8NI28 AL355877.2-201ENST00000603670 358 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 AC087045.1-201ENST00000605856 382 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 RNU6-85P-201ENST00000605989 107 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 AL627309.6-201ENST00000606857 840 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01006Q8NI28 MIR7843-201ENST00000622274 79 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 Z69720.2-201ENST00000624755 279 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 MIR6733-201ENST00000635723 61 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 MIR3199-2-201ENST00000636243 86 ntBASIC1.95□□□□□ -2.1
LINC01006Q8NI28 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01006Q8NI28 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01006Q8NI28 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 Y_RNA.100-201ENST00000363141 102 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 RNU6-254P-201ENST00000363377 107 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 Y_RNA.414-201ENST00000384011 101 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 Y_RNA.530-201ENST00000384587 101 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 FTH1P15-201ENST00000406984 280 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 U3.37-201ENST00000408528 213 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 AC096649.2-201ENST00000416186 393 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 AC009161.1-201ENST00000417306 376 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 RPL7P10-201ENST00000417407 739 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 RPL21P111-201ENST00000418453 477 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 SAR1AP4-201ENST00000429225 591 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 MTND4P18-201ENST00000447010 465 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 AL353705.4-201ENST00000449661 238 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 RN7SL499P-201ENST00000481141 276 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 AC116655.1-201ENST00000508324 901 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 AC234781.5-201ENST00000508429 271 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 MRPS36P2-201ENST00000512569 299 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 RNU6-1332P-201ENST00000516666 104 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 CYCSP27-201ENST00000527643 293 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 AC118273.2-201ENST00000532092 465 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 MIR3941-201ENST00000582572 103 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 AC005730.3-201ENST00000583067 366 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 AC008121.1-201ENST00000603244 268 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 AC019159.1-201ENST00000605094 187 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 AC069234.5-201ENST00000611056 416 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01006Q8NI28 AC010889.1-201ENST00000566193 2666 ntBASIC1.94□□□□□ -2.1
LINC01006Q8NI28 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LINC01006Q8NI28 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LINC01006Q8NI28 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
LINC01006Q8NI28 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LINC01006Q8NI28 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LINC01006Q8NI28 CBX3P1-201ENST00000325243 554 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms