Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 RNA5SP219-201ENST00000390940 113 ntBASIC2.36□□□□□ -2.03
CCDC63Q8NA47 SNORD37.1-201ENST00000390968 65 ntBASIC2.36□□□□□ -2.03
CCDC63Q8NA47 AC097463.2-201ENST00000421074 142 ntBASIC2.36□□□□□ -2.03
CCDC63Q8NA47 BX276092.3-201ENST00000424182 230 ntBASIC2.36□□□□□ -2.03
CCDC63Q8NA47 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC63Q8NA47 SEPT14P3-201ENST00000439401 183 ntBASIC2.36□□□□□ -2.03
CCDC63Q8NA47 AL732372.2-207ENST00000445840 183 ntBASIC2.36□□□□□ -2.03
CCDC63Q8NA47 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC63Q8NA47 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC63Q8NA47 SEPT14P2-201ENST00000453405 183 ntBASIC2.36□□□□□ -2.03
CCDC63Q8NA47 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC63Q8NA47 AC117503.1-201ENST00000472241 394 ntBASIC2.36□□□□□ -2.03
CCDC63Q8NA47 AC090255.1-201ENST00000495779 349 ntBASIC2.36□□□□□ -2.03
CCDC63Q8NA47 SEPT14P4-201ENST00000513445 186 ntBASIC2.36□□□□□ -2.03
CCDC63Q8NA47 RN7SKP132-201ENST00000516001 208 ntBASIC2.36□□□□□ -2.03
CCDC63Q8NA47 FO082796.1-201ENST00000523795 183 ntBASIC2.36□□□□□ -2.03
CCDC63Q8NA47 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC63Q8NA47 RPS3AP23-202ENST00000574601 686 ntBASIC2.36□□□□□ -2.03
CCDC63Q8NA47 AC090897.2-201ENST00000581715 130 ntBASIC2.36□□□□□ -2.03
CCDC63Q8NA47 AC105245.1-201ENST00000581934 244 ntBASIC2.36□□□□□ -2.03
CCDC63Q8NA47 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC63Q8NA47 MIR92B-201ENST00000607575 96 ntBASIC2.36□□□□□ -2.03
CCDC63Q8NA47 AC069294.1-201ENST00000608397 350 ntBASIC2.36□□□□□ -2.03
CCDC63Q8NA47 FER-210ENST00000628534 558 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC63Q8NA47 AP000553.5-201ENST00000641933 54 ntBASIC2.36□□□□□ -2.03
CCDC63Q8NA47 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC63Q8NA47 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
CCDC63Q8NA47 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC63Q8NA47 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC63Q8NA47 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC63Q8NA47 AC138393.1-203ENST00000327086 343 ntBASIC2.35□□□□□ -2.03
CCDC63Q8NA47 SNORD46.1-201ENST00000364139 104 ntBASIC2.35□□□□□ -2.03
CCDC63Q8NA47 POLHP1-201ENST00000411806 470 ntBASIC2.35□□□□□ -2.03
CCDC63Q8NA47 HMGB3P2-201ENST00000411913 584 ntBASIC2.35□□□□□ -2.03
CCDC63Q8NA47 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC63Q8NA47 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC63Q8NA47 AL365400.1-201ENST00000431854 640 ntBASIC2.35□□□□□ -2.03
CCDC63Q8NA47 AC007969.2-201ENST00000441891 191 ntBASIC2.35□□□□□ -2.03
CCDC63Q8NA47 AC013470.1-201ENST00000453438 462 ntBASIC2.35□□□□□ -2.03
CCDC63Q8NA47 AC006026.2-201ENST00000457376 180 ntBASIC2.35□□□□□ -2.03
CCDC63Q8NA47 AC079804.2-201ENST00000490376 200 ntBASIC2.35□□□□□ -2.03
CCDC63Q8NA47 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC63Q8NA47 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC63Q8NA47 SNORA14.1-201ENST00000516113 141 ntBASIC2.35□□□□□ -2.03
CCDC63Q8NA47 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.35□□□□□ -2.03
CCDC63Q8NA47 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.35□□□□□ -2.03
CCDC63Q8NA47 AC105137.2-201ENST00000569073 466 ntBASIC2.35□□□□□ -2.03
CCDC63Q8NA47 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC63Q8NA47 MIR6840-201ENST00000611937 71 ntBASIC2.35□□□□□ -2.03
CCDC63Q8NA47 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC63Q8NA47 AC103705.1-201ENST00000619013 241 ntBASIC2.35□□□□□ -2.03
CCDC63Q8NA47 AC012640.5-201ENST00000623897 319 ntBASIC2.35□□□□□ -2.03
CCDC63Q8NA47 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
CCDC63Q8NA47 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CCDC63Q8NA47 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.34□□□□□ -2.03
CCDC63Q8NA47 RNU6-1010P-201ENST00000362757 107 ntBASIC2.34□□□□□ -2.03
CCDC63Q8NA47 SNORD56.1-201ENST00000362913 68 ntBASIC2.34□□□□□ -2.03
CCDC63Q8NA47 RNY3P3-201ENST00000363816 102 ntBASIC2.34□□□□□ -2.03
CCDC63Q8NA47 SNORA38-201ENST00000363946 132 ntBASIC2.34□□□□□ -2.03
CCDC63Q8NA47 RNU6-82P-201ENST00000363970 107 ntBASIC2.34□□□□□ -2.03
CCDC63Q8NA47 RNU6-522P-201ENST00000364497 107 ntBASIC2.34□□□□□ -2.03
CCDC63Q8NA47 RNA5SP37-201ENST00000365420 130 ntBASIC2.34□□□□□ -2.03
CCDC63Q8NA47 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC63Q8NA47 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC63Q8NA47 AC003685.2-201ENST00000422795 395 ntBASIC2.34□□□□□ -2.03
CCDC63Q8NA47 MTCO1P20-201ENST00000425366 358 ntBASIC2.34□□□□□ -2.03
CCDC63Q8NA47 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC63Q8NA47 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC63Q8NA47 MTND1P34-201ENST00000438556 671 ntBASIC2.34□□□□□ -2.03
CCDC63Q8NA47 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.34□□□□□ -2.03
CCDC63Q8NA47 RPL21P99-201ENST00000480369 423 ntBASIC2.34□□□□□ -2.03
CCDC63Q8NA47 RPL22P13-201ENST00000493291 347 ntBASIC2.34□□□□□ -2.03
CCDC63Q8NA47 RNU6-189P-201ENST00000516120 101 ntBASIC2.34□□□□□ -2.03
CCDC63Q8NA47 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.34□□□□□ -2.03
CCDC63Q8NA47 ZNF519P2-201ENST00000557032 169 ntBASIC2.34□□□□□ -2.03
CCDC63Q8NA47 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC63Q8NA47 MIR3941-201ENST00000582572 103 ntBASIC2.34□□□□□ -2.03
CCDC63Q8NA47 AC092807.2-201ENST00000609367 243 ntBASIC2.34□□□□□ -2.03
CCDC63Q8NA47 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
CCDC63Q8NA47 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC63Q8NA47 AL365361.1-201ENST00000566942 3481 ntBASIC2.34□□□□□ -2.04
CCDC63Q8NA47 OR4G1P-203ENST00000641984 1631 ntBASIC2.33□□□□□ -2.04
CCDC63Q8NA47 RNU6-105P-201ENST00000363909 104 ntBASIC2.33□□□□□ -2.04
CCDC63Q8NA47 Y_RNA.231-201ENST00000364358 102 ntBASIC2.33□□□□□ -2.04
CCDC63Q8NA47 MIR196B-201ENST00000384852 84 ntBASIC2.33□□□□□ -2.04
CCDC63Q8NA47 AL117339.3-201ENST00000418733 162 ntBASIC2.33□□□□□ -2.04
CCDC63Q8NA47 EIF4EP4-201ENST00000424916 578 ntBASIC2.33□□□□□ -2.04
CCDC63Q8NA47 AC008267.5-201ENST00000424928 265 ntBASIC2.33□□□□□ -2.04
CCDC63Q8NA47 RPS3AP44-201ENST00000425466 790 ntBASIC2.33□□□□□ -2.04
CCDC63Q8NA47 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC63Q8NA47 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC63Q8NA47 RNU6-1208P-201ENST00000459588 107 ntBASIC2.33□□□□□ -2.04
CCDC63Q8NA47 Y_RNA.654-201ENST00000497848 106 ntBASIC2.33□□□□□ -2.04
CCDC63Q8NA47 RPL38P4-201ENST00000502376 214 ntBASIC2.33□□□□□ -2.04
CCDC63Q8NA47 AC091885.1-201ENST00000506658 268 ntBASIC2.33□□□□□ -2.04
CCDC63Q8NA47 AC008526.1-201ENST00000509149 338 ntBASIC2.33□□□□□ -2.04
CCDC63Q8NA47 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC63Q8NA47 AC026436.1-201ENST00000510537 270 ntBASIC2.33□□□□□ -2.04
CCDC63Q8NA47 SNORD60.2-201ENST00000516883 86 ntBASIC2.33□□□□□ -2.04
CCDC63Q8NA47 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms