Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC068647.1-201ENST00000489539 2265 ntBASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SLC44A3Q8N4M1 PWAR6-201ENST00000552334 4618 ntBASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-1317P-201ENST00000364582 104 ntBASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 Y_RNA.533-201ENST00000384596 114 ntBASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 RNU2-33P-201ENST00000410344 192 ntBASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 RN7SKP284-201ENST00000411002 343 ntBASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 ARL5AP4-201ENST00000430731 512 ntBASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 DYNLT3P2-201ENST00000442517 295 ntBASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 AL049830.2-201ENST00000480072 201 ntBASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-143P-201ENST00000516942 93 ntBASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 AP006245.1-201ENST00000522549 120 ntBASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 MIR3921-201ENST00000577308 85 ntBASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 MIR3186-201ENST00000577404 85 ntBASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 MIR5696-201ENST00000578474 85 ntBASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 MIR4738-201ENST00000579134 87 ntBASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 AC009314.1-201ENST00000603871 304 ntBASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 AP000787.2-201ENST00000604432 568 ntBASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 RAC1P9-201ENST00000604990 392 ntBASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 AC233263.6-201ENST00000631132 1963 ntBASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
SLC44A3Q8N4M1 ZNF72P-201ENST00000425869 1908 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-37P-201ENST00000362692 107 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 Y_RNA.152-201ENST00000363578 100 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 Y_RNA.214-201ENST00000364201 112 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-11P-201ENST00000364234 107 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNA5SP126-201ENST00000365092 109 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-25P-201ENST00000383873 107 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-1-201ENST00000383898 107 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-48P-201ENST00000384161 107 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-36P-201ENST00000384172 107 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-4P-201ENST00000384205 107 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-5P-201ENST00000384238 107 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-3P-201ENST00000384314 107 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-16P-201ENST00000384385 107 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-15P-201ENST00000384534 107 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 Y_RNA.518-201ENST00000384552 113 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-2-201ENST00000384627 107 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-29P-201ENST00000384637 107 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-9-201ENST00000384776 107 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-33P-201ENST00000384793 107 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 FCF1P4-201ENST00000448326 183 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 AC013470.1-201ENST00000453438 462 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-1037P-201ENST00000459571 107 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 AC107222.1-201ENST00000510899 637 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 AC008885.1-201ENST00000514930 301 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU2-53P-201ENST00000516257 147 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNY3P15-201ENST00000516297 97 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 Y_RNA.680-201ENST00000516441 93 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU7-4P-201ENST00000516961 62 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-388P-201ENST00000517012 105 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-389P-201ENST00000517048 105 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 HMGB1P14-201ENST00000557424 591 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 ZNF192P1-203ENST00000565888 810 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 AC006600.1-201ENST00000572529 153 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-6P-201ENST00000606623 107 ntBASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SLC44A3Q8N4M1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 AC073073.2-201ENST00000609827 2578 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 Y_RNA.26-201ENST00000362539 101 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 Y_RNA.257-201ENST00000364596 102 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-283P-201ENST00000364788 107 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 Y_RNA.447-201ENST00000384184 113 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 MIR184-201ENST00000384962 84 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 MT-TW-201ENST00000387382 68 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 SNORA40C-201ENST00000391285 128 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 Y_RNA.623-201ENST00000411128 95 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 EI24P1-201ENST00000416584 867 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 ELOCP20-201ENST00000422460 345 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms