Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM42Q8IWZ5 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.27□□□□□ -1.73
TRIM42Q8IWZ5 RN7SL354P-201ENST00000469282 294 ntBASIC4.27□□□□□ -1.73
TRIM42Q8IWZ5 AP000870.1-201ENST00000472927 406 ntBASIC4.27□□□□□ -1.73
TRIM42Q8IWZ5 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM42Q8IWZ5 RN7SKP49-201ENST00000516675 260 ntBASIC4.27□□□□□ -1.73
TRIM42Q8IWZ5 RNU6-567P-201ENST00000516746 107 ntBASIC4.27□□□□□ -1.73
TRIM42Q8IWZ5 MIR4330-201ENST00000579077 105 ntBASIC4.27□□□□□ -1.73
TRIM42Q8IWZ5 KLKP1-201ENST00000595979 403 ntBASIC4.27□□□□□ -1.73
TRIM42Q8IWZ5 AL133393.1-201ENST00000603277 287 ntBASIC4.27□□□□□ -1.73
TRIM42Q8IWZ5 AC012531.5-201ENST00000611375 151 ntBASIC4.27□□□□□ -1.73
TRIM42Q8IWZ5 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM42Q8IWZ5 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM42Q8IWZ5 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.27□□□□□ -1.73
TRIM42Q8IWZ5 U2.21-201ENST00000637295 81 ntBASIC4.27□□□□□ -1.73
TRIM42Q8IWZ5 AC241585.2-209ENST00000638217 143 ntBASIC4.27□□□□□ -1.73
TRIM42Q8IWZ5 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TRIM42Q8IWZ5 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM42Q8IWZ5 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM42Q8IWZ5 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM42Q8IWZ5 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 RNU6-778P-201ENST00000363269 103 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 RNA5SP197-201ENST00000363357 119 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 RNU4-84P-201ENST00000364200 139 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 RNU4-56P-201ENST00000364700 142 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 RNA5SP505-201ENST00000364748 108 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 RNU6-818P-201ENST00000364837 108 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 RNU1-89P-201ENST00000384592 164 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 MIR1179-201ENST00000408703 91 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 AC245028.1-201ENST00000423259 256 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 AC010154.1-201ENST00000425857 269 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 POLR2KP2-201ENST00000438155 177 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 AC096638.1-201ENST00000444678 216 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 AC009237.7-201ENST00000447357 229 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 AC005840.1-201ENST00000498412 377 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 SNORA40.9-201ENST00000515895 93 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 RNA5SP272-201ENST00000516095 111 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 AC006064.5-201ENST00000541782 248 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 AC020895.1-201ENST00000595362 272 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 MIR7703-201ENST00000620784 77 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 AL079305.1-201ENST00000623159 3008 ntBASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM42Q8IWZ5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 Y_RNA.23-201ENST00000362496 106 ntBASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 RNU6-884P-201ENST00000363889 107 ntBASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 RNA5SP175-201ENST00000364275 119 ntBASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 Y_RNA.230-201ENST00000364348 109 ntBASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 RNU6-1175P-201ENST00000365200 107 ntBASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 RNU6-968P-201ENST00000384076 107 ntBASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 MIR32-201ENST00000384965 70 ntBASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 RPL23AP3-201ENST00000453844 468 ntBASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 RPL35AP15-201ENST00000468042 339 ntBASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 RPL23AP14-201ENST00000468281 468 ntBASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 HMGB3P3-201ENST00000510526 400 ntBASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 AL359881.1-201ENST00000602916 267 ntBASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 AC079587.1-201ENST00000603846 277 ntBASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 AL021997.2-201ENST00000615674 271 ntBASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 Y_RNA.778-201ENST00000620203 90 ntBASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
TRIM42Q8IWZ5 AL672296.1-201ENST00000427780 2158 ntBASIC4.24□□□□□ -1.73
TRIM42Q8IWZ5 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM42Q8IWZ5 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM42Q8IWZ5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM42Q8IWZ5 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
TRIM42Q8IWZ5 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM42Q8IWZ5 Y_RNA.127-201ENST00000363386 109 ntBASIC4.24□□□□□ -1.73
TRIM42Q8IWZ5 RNU6-961P-201ENST00000363893 105 ntBASIC4.24□□□□□ -1.73
TRIM42Q8IWZ5 RN7SKP280-201ENST00000364196 304 ntBASIC4.24□□□□□ -1.73
TRIM42Q8IWZ5 SNORA56-201ENST00000383966 129 ntBASIC4.24□□□□□ -1.73
TRIM42Q8IWZ5 MIR518D-201ENST00000385014 87 ntBASIC4.24□□□□□ -1.73
TRIM42Q8IWZ5 MIR153-2-201ENST00000385225 87 ntBASIC4.24□□□□□ -1.73
TRIM42Q8IWZ5 MIR888-201ENST00000401186 77 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms