Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 RNU1-35P-201ENST00000362782 153 ntBASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 RNU6-942P-201ENST00000363002 107 ntBASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 Y_RNA.356-201ENST00000365475 113 ntBASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 DYNLT3P1-201ENST00000378574 347 ntBASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 MIR512-1-201ENST00000384913 84 ntBASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 AL117339.3-201ENST00000418733 162 ntBASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 RPS15AP10-201ENST00000432472 382 ntBASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 MTND1P17-201ENST00000448961 204 ntBASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 AC107399.1-201ENST00000451226 265 ntBASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 MRPL42P6-201ENST00000486397 371 ntBASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 FGF7P4-201ENST00000509595 295 ntBASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 RNU6-377P-201ENST00000515965 102 ntBASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 RAB11AP2-201ENST00000545905 639 ntBASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 AC079600.2-201ENST00000550076 130 ntBASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 AL670379.10-201ENST00000604330 253 ntBASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 AL670379.9-201ENST00000605428 253 ntBASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 AL121917.1-203ENST00000605534 577 ntBASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 AL132765.2-201ENST00000610812 351 ntBASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SCN4BQ8IWT1 RNU6-858P-201ENST00000362436 107 ntBASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 RNU6-827P-201ENST00000365553 106 ntBASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 Y_RNA.529-201ENST00000384586 119 ntBASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 RPL21P3-201ENST00000395517 478 ntBASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 FTH1P15-201ENST00000406984 280 ntBASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 MIR548K-201ENST00000408406 116 ntBASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 MIR548F5-201ENST00000408421 86 ntBASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 RN7SKP58-201ENST00000411010 305 ntBASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 AC074085.1-201ENST00000413598 418 ntBASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 AL590632.1-201ENST00000424289 371 ntBASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 PTGES3P4-201ENST00000426243 356 ntBASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 AC146507.2-201ENST00000460608 476 ntBASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 HPRT1P3-201ENST00000539521 576 ntBASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 RPS3AP23-202ENST00000574601 686 ntBASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 MIR4319-201ENST00000577285 85 ntBASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 AC064836.2-201ENST00000609491 462 ntBASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 AC010889.1-201ENST00000566193 2666 ntBASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 AC026241.1-201ENST00000517873 2142 ntBASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 AC092593.1-201ENST00000515413 1815 ntBASIC2.96□□□□□ -1.94
SCN4BQ8IWT1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 RNU6-95P-201ENST00000384697 107 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 RNU6-19P-201ENST00000384718 107 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 AL031121.1-201ENST00000406553 254 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 AL645568.3-201ENST00000433683 316 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 UBBP3-201ENST00000445497 241 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 AC013470.1-201ENST00000453438 462 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 RNU6-1037P-201ENST00000459571 107 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 UBE2DNL-203ENST00000474922 222 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 RPL23AP49-201ENST00000492925 468 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 RPS27P27-201ENST00000498779 255 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 MTND5P5-201ENST00000503764 376 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 AK3P2-201ENST00000507976 429 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 MTCYBP40-201ENST00000509390 1135 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 ACA59.2-201ENST00000517061 156 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 AC010186.2-204ENST00000537668 439 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 GLYCAM1-201ENST00000546596 285 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 AL117336.2-201ENST00000602435 335 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 AC006023.1-201ENST00000603944 259 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 AC009233.1-201ENST00000616477 371 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 MIR1302-1-201ENST00000637932 143 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 AC112487.2-201ENST00000637950 304 ntBASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.95□□□□□ -1.94
SCN4BQ8IWT1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SCN4BQ8IWT1 RNU6-797P-201ENST00000363101 109 ntBASIC2.94□□□□□ -1.94
SCN4BQ8IWT1 RNU1-112P-201ENST00000364401 164 ntBASIC2.94□□□□□ -1.94
SCN4BQ8IWT1 Y_RNA.339-201ENST00000365325 102 ntBASIC2.94□□□□□ -1.94
SCN4BQ8IWT1 SNORD116-20-201ENST00000384529 92 ntBASIC2.94□□□□□ -1.94
SCN4BQ8IWT1 AL138827.1-201ENST00000402666 306 ntBASIC2.94□□□□□ -1.94
SCN4BQ8IWT1 AL078595.1-201ENST00000404458 226 ntBASIC2.94□□□□□ -1.94
SCN4BQ8IWT1 RN7SKP158-201ENST00000410453 326 ntBASIC2.94□□□□□ -1.94
SCN4BQ8IWT1 RNU6-293P-201ENST00000411259 106 ntBASIC2.94□□□□□ -1.94
SCN4BQ8IWT1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.94□□□□□ -1.94
SCN4BQ8IWT1 AC012308.1-201ENST00000451232 178 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms