Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 FO624990.1-201ENST00000636373 85 ntBASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 Y_RNA.324-201ENST00000365165 102 ntBASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 RNU4-66P-201ENST00000365199 138 ntBASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 RNU6-1083P-201ENST00000384022 107 ntBASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 RNU1-138P-201ENST00000384093 164 ntBASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 SNORA67.3-201ENST00000384366 140 ntBASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 Z98742.2-201ENST00000431564 187 ntBASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 HMGB1P31-201ENST00000437242 427 ntBASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 AC004383.1-201ENST00000438135 289 ntBASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 AC012308.1-201ENST00000451232 178 ntBASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 AL441985.1-201ENST00000457727 251 ntBASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 MTAPP1-201ENST00000489154 819 ntBASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 SNORA25.11-201ENST00000515935 105 ntBASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 OR5AQ1P-201ENST00000527596 927 ntBASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 AC002044.1-201ENST00000606707 158 ntBASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 U2.17-201ENST00000611454 95 ntBASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 YWHAEP7-203ENST00000622054 312 ntBASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 SCARNA4-202ENST00000625402 129 ntBASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC60Q8IWA6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 SNORA38-201ENST00000363946 132 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 RNU4-12P-201ENST00000365233 139 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 RNU6-748P-201ENST00000384648 107 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 SNORA80E-201ENST00000384744 137 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 MIR181A1-201ENST00000385026 110 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 RNA5SP219-201ENST00000390940 113 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 RAP1BP3-201ENST00000407180 549 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 SNORA11.4-201ENST00000408823 129 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 RNU6-1068P-201ENST00000410958 103 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 USP9YP27-201ENST00000418455 438 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 SEPT14P3-201ENST00000439401 183 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 AL732372.2-207ENST00000445840 183 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 SEPT14P2-201ENST00000453405 183 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 MED28P2-201ENST00000475771 317 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 SEPT14P4-201ENST00000513445 186 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 SCARNA11.3-201ENST00000517276 130 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 FO082796.1-201ENST00000523795 183 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 TPRKBP2-201ENST00000565969 475 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 MIR4446-201ENST00000578505 67 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 AL162413.1-201ENST00000603198 110 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 AC008121.1-201ENST00000603244 268 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 AL670379.10-201ENST00000604330 253 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 AL670379.9-201ENST00000605428 253 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 HMGB1P24-202ENST00000615653 685 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 AC027514.1-201ENST00000588561 1603 ntBASIC2.42□□□□□ -2.02
CCDC60Q8IWA6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 RNU6-37P-201ENST00000362692 107 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 RNU6-11P-201ENST00000364234 107 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 RNU6-25P-201ENST00000383873 107 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 RNU6-1-201ENST00000383898 107 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 RNU6-48P-201ENST00000384161 107 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 RNU6-36P-201ENST00000384172 107 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 RNU6-4P-201ENST00000384205 107 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 RNU6-5P-201ENST00000384238 107 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 RNU6-3P-201ENST00000384314 107 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 RNU6-16P-201ENST00000384385 107 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 SNORD116-20-201ENST00000384529 92 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 RNU6-15P-201ENST00000384534 107 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 RNU6-2-201ENST00000384627 107 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 RNU6-29P-201ENST00000384637 107 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 RNU6-9-201ENST00000384776 107 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 RNU6-33P-201ENST00000384793 107 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 RNU6-648P-201ENST00000410190 107 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 RNU6-1328P-201ENST00000410938 106 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 AF274854.1-201ENST00000413236 615 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 BX276092.3-201ENST00000424182 230 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 MTCO1P20-201ENST00000425366 358 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 FABP5P14-201ENST00000437273 393 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 RNU7-167P-201ENST00000459160 62 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 snoU13.15-201ENST00000459407 104 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 DYNLL1P5-201ENST00000467158 270 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 MTCO3P38-201ENST00000468910 766 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 AP000889.2-201ENST00000532684 490 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 PRELID2P1-201ENST00000552837 301 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms