Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 TOMM20P2-201ENST00000540082 421 ntBASIC3.79□□□□□ -1.8
ATG4DQ86TL0 AC090877.1-201ENST00000561418 344 ntBASIC3.79□□□□□ -1.8
ATG4DQ86TL0 AC004467.1-201ENST00000615678 330 ntBASIC3.79□□□□□ -1.8
ATG4DQ86TL0 MIR3653-201ENST00000625572 110 ntBASIC3.79□□□□□ -1.8
ATG4DQ86TL0 SNORA43.4-201ENST00000629559 138 ntBASIC3.79□□□□□ -1.8
ATG4DQ86TL0 MIR6715B-201ENST00000637172 77 ntBASIC3.79□□□□□ -1.8
ATG4DQ86TL0 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
ATG4DQ86TL0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4DQ86TL0 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4DQ86TL0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
ATG4DQ86TL0 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.79□□□□□ -1.8
ATG4DQ86TL0 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
ATG4DQ86TL0 MTND5P32-201ENST00000560711 1802 ntBASIC3.79□□□□□ -1.8
ATG4DQ86TL0 AC026951.1-201ENST00000559530 2459 ntBASIC3.79□□□□□ -1.8
ATG4DQ86TL0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4DQ86TL0 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 MIR383-201ENST00000362257 73 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 RNU4-10P-201ENST00000364383 140 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 RNA5SP267-201ENST00000364893 126 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 SNORA37-201ENST00000384504 129 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 Y_RNA.563-201ENST00000384707 108 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 MIR93-201ENST00000385024 80 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 RNU6-460P-201ENST00000391158 108 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 Y_RNA.595-201ENST00000410403 105 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 AL451050.1-201ENST00000450126 415 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 RNA5SP246-201ENST00000458909 119 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 RNU6-625P-201ENST00000459412 107 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 SNRPGP7-201ENST00000469016 106 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 AL121594.1-201ENST00000475906 575 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 RPL31P13-201ENST00000484151 370 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 AC099522.1-202ENST00000514718 367 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 RNA5SP76-201ENST00000516277 87 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 AC107016.1-201ENST00000550463 337 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 TVP23BP1-201ENST00000557500 617 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 ZNF192P1-203ENST00000565888 810 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 MIR3160-1-201ENST00000577972 85 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 MIR4744-201ENST00000581563 82 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 AL591034.3-201ENST00000605511 685 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 AC069294.1-201ENST00000608397 350 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 ZYXP1-201ENST00000617638 118 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 AC091932.3-201ENST00000624223 323 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 SCARNA4-202ENST00000625402 129 ntBASIC3.78□□□□□ -1.8
ATG4DQ86TL0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4DQ86TL0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.78□□□□□ -1.81
ATG4DQ86TL0 AC010300.1-201ENST00000600671 5134 ntBASIC3.77□□□□□ -1.81
ATG4DQ86TL0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
ATG4DQ86TL0 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.77□□□□□ -1.81
ATG4DQ86TL0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ATG4DQ86TL0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ATG4DQ86TL0 SNORA22-201ENST00000383907 134 ntBASIC3.77□□□□□ -1.81
ATG4DQ86TL0 SNORA70C-201ENST00000384538 135 ntBASIC3.77□□□□□ -1.81
ATG4DQ86TL0 RNU6-476P-201ENST00000384726 107 ntBASIC3.77□□□□□ -1.81
ATG4DQ86TL0 RNU6-763P-201ENST00000390865 106 ntBASIC3.77□□□□□ -1.81
ATG4DQ86TL0 U3.19-201ENST00000390893 196 ntBASIC3.77□□□□□ -1.81
ATG4DQ86TL0 RPL23AP48-201ENST00000406913 488 ntBASIC3.77□□□□□ -1.81
ATG4DQ86TL0 MTHFD2P2-201ENST00000407725 247 ntBASIC3.77□□□□□ -1.81
ATG4DQ86TL0 RNU7-197P-201ENST00000458836 62 ntBASIC3.77□□□□□ -1.81
ATG4DQ86TL0 RPS20P22-201ENST00000473700 357 ntBASIC3.77□□□□□ -1.81
ATG4DQ86TL0 Y_RNA.709-201ENST00000516952 92 ntBASIC3.77□□□□□ -1.81
ATG4DQ86TL0 AP003730.1-201ENST00000524605 285 ntBASIC3.77□□□□□ -1.81
ATG4DQ86TL0 AC021269.2-201ENST00000532318 330 ntBASIC3.77□□□□□ -1.81
ATG4DQ86TL0 AC022655.2-201ENST00000577280 318 ntBASIC3.77□□□□□ -1.81
ATG4DQ86TL0 AC015813.4-201ENST00000610469 179 ntBASIC3.77□□□□□ -1.81
ATG4DQ86TL0 U6.99-201ENST00000637524 83 ntBASIC3.77□□□□□ -1.81
ATG4DQ86TL0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.77□□□□□ -1.81
ATG4DQ86TL0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
ATG4DQ86TL0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.77□□□□□ -1.81
ATG4DQ86TL0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
ATG4DQ86TL0 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.77□□□□□ -1.81
ATG4DQ86TL0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
ATG4DQ86TL0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.76□□□□□ -1.81
ATG4DQ86TL0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
ATG4DQ86TL0 RNU6-873P-201ENST00000363833 107 ntBASIC3.76□□□□□ -1.81
ATG4DQ86TL0 snoU2_19.4-201ENST00000364329 80 ntBASIC3.76□□□□□ -1.81
ATG4DQ86TL0 SNORD32A-201ENST00000364805 84 ntBASIC3.76□□□□□ -1.81
ATG4DQ86TL0 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.76□□□□□ -1.81
ATG4DQ86TL0 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
ATG4DQ86TL0 SNORA36A-201ENST00000384221 132 ntBASIC3.76□□□□□ -1.81
ATG4DQ86TL0 SNORD37.2-201ENST00000391075 66 ntBASIC3.76□□□□□ -1.81
ATG4DQ86TL0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms