Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 Y_RNA.577-201ENST00000384794 101 ntBASIC3.15□□□□□ -1.91
YTHDF3Q7Z739 MIR490-201ENST00000384865 128 ntBASIC3.15□□□□□ -1.91
YTHDF3Q7Z739 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
YTHDF3Q7Z739 RPL21P1-201ENST00000399532 476 ntBASIC3.15□□□□□ -1.91
YTHDF3Q7Z739 RNU2-37P-201ENST00000410695 177 ntBASIC3.15□□□□□ -1.91
YTHDF3Q7Z739 AL031274.1-201ENST00000450334 232 ntBASIC3.15□□□□□ -1.91
YTHDF3Q7Z739 FABP5P15-201ENST00000453566 214 ntBASIC3.15□□□□□ -1.91
YTHDF3Q7Z739 U3.44-201ENST00000458938 192 ntBASIC3.15□□□□□ -1.91
YTHDF3Q7Z739 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.15□□□□□ -1.91
YTHDF3Q7Z739 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.15□□□□□ -1.91
YTHDF3Q7Z739 AC131281.1-201ENST00000522984 164 ntBASIC3.15□□□□□ -1.91
YTHDF3Q7Z739 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.15□□□□□ -1.91
YTHDF3Q7Z739 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.15□□□□□ -1.91
YTHDF3Q7Z739 MIR5188-201ENST00000583467 113 ntBASIC3.15□□□□□ -1.91
YTHDF3Q7Z739 Z98751.3-201ENST00000604447 521 ntBASIC3.15□□□□□ -1.91
YTHDF3Q7Z739 AL121917.1-203ENST00000605534 577 ntBASIC3.15□□□□□ -1.91
YTHDF3Q7Z739 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.15□□□□□ -1.91
YTHDF3Q7Z739 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
YTHDF3Q7Z739 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 AC007256.1-201ENST00000392253 2765 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 DEFB108F-201ENST00000344638 222 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 RNU6-335P-201ENST00000364563 113 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 Y_RNA.307-201ENST00000365022 117 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 Y_RNA.314-201ENST00000365114 102 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 RNU6-395P-201ENST00000365662 106 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 Y_RNA.396-201ENST00000383949 103 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 RNU6-1026P-201ENST00000384465 108 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 MIR301A-201ENST00000385261 86 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 U3.42-201ENST00000408746 214 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 MIR1252-201ENST00000408861 65 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 RNU6-1156P-201ENST00000410365 100 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 AL451074.5-201ENST00000415894 435 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 DBIP2-201ENST00000419076 262 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 RPS15AP10-201ENST00000432472 382 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 CECR9-201ENST00000453421 199 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 FO393415.2-201ENST00000480085 343 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 AC114801.2-201ENST00000503825 781 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 SCARNA15.2-201ENST00000516409 127 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 SNORA40.14-201ENST00000516543 86 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 Y_RNA.715-201ENST00000517082 110 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 AC007458.1-201ENST00000542812 373 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 HSBP1P1-201ENST00000555205 166 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 SNORD84-203ENST00000584275 78 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 AC002545.1-201ENST00000592511 181 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 AL158827.2-201ENST00000602494 330 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 MIR3976-201ENST00000606807 139 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 AC011373.1-201ENST00000607270 237 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 MIR7851-201ENST00000610611 160 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 AL359198.2-201ENST00000611836 194 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 AL691447.3-201ENST00000635020 330 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 ZNF72P-201ENST00000425869 1908 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 AL049781.1-201ENST00000623195 3585 ntBASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
YTHDF3Q7Z739 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 RNY1P16-201ENST00000363063 111 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 RNA5SP197-201ENST00000363357 119 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 RNY3P11-201ENST00000364153 102 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 Y_RNA.210-201ENST00000364161 110 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 SNORA38.1-201ENST00000364172 131 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 U8.8-201ENST00000365399 135 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 SNORD14.1-201ENST00000365609 90 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 Y_RNA.424-201ENST00000384063 103 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 RNU6-472P-201ENST00000384299 107 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 RNU6-790P-201ENST00000384479 105 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 SNORA48.2-201ENST00000390926 124 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 RNU6-1025P-201ENST00000410629 104 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 AC009310.1-201ENST00000414414 451 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 AL096701.2-201ENST00000416920 238 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 AC092573.2-201ENST00000434546 243 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 HIGD1AP2-201ENST00000446367 280 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 PCNPP5-201ENST00000452246 481 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 RPS24P6-201ENST00000452670 400 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 AC010285.1-201ENST00000470580 392 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 RPS20P22-201ENST00000473700 357 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 HMGN2P13-201ENST00000476476 274 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 MED28P6-201ENST00000558776 231 ntBASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
YTHDF3Q7Z739 SNRPGP15-201ENST00000600149 222 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms