Protein–RNA interactions for Protein: Q6ZSB3

LINC00299, Putative uncharacterized protein encoded by LINC00299, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299Q6ZSB3 MIR340-201ENST00000362125 95 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 MIR378A-201ENST00000362177 66 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 Y_RNA.33-201ENST00000362591 102 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 SNORD3E-201ENST00000362899 217 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 RNU6-487P-201ENST00000365430 104 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 RNU6-1065P-201ENST00000384513 106 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 AC092809.3-201ENST00000415453 231 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 AP1B1P2-201ENST00000416196 106 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 AL365338.1-201ENST00000422282 858 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 AL953862.1-201ENST00000423016 168 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 CBX3P6-201ENST00000430257 527 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 AL121890.1-201ENST00000435457 205 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 RNU5A-4P-201ENST00000516588 111 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 SNORA31.16-201ENST00000516773 139 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 CYCSP23-201ENST00000519781 313 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 AC087897.1-201ENST00000550134 156 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 AL157871.3-201ENST00000557231 293 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 MIR1273C-201ENST00000578669 77 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 AC022022.2-201ENST00000602989 360 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 AC022893.3-201ENST00000607665 437 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 AL021879.1-201ENST00000611756 288 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 MTND5P42-201ENST00000637720 498 ntBASIC0.51□□□□□ -2.33
LINC00299Q6ZSB3 RNU1-36P-201ENST00000365130 165 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 MIR520A-201ENST00000384862 85 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 RNA5SP213-201ENST00000391031 106 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 RNU6-817P-201ENST00000391083 104 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 SNORA12-201ENST00000391162 147 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 USP9YP33-201ENST00000412220 421 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 AC013410.2-201ENST00000422627 201 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 AL365400.1-201ENST00000431854 640 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 AL591704.1-201ENST00000432574 275 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 AL591212.2-201ENST00000433923 257 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 AC099677.2-201ENST00000436385 175 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 AL122001.1-201ENST00000457027 370 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 AL139824.2-201ENST00000458731 1095 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 HMGN2P9-201ENST00000476875 229 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 RAP1BP2-201ENST00000478270 544 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 AC117454.1-201ENST00000491120 168 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 AC145146.1-201ENST00000496370 254 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 SUMO2P5-201ENST00000506790 245 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 CBX3P8-201ENST00000532412 525 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 BNIP3P31-201ENST00000604515 566 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 AP000654.2-201ENST00000605633 586 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 AC099785.1-201ENST00000605697 437 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 AC099654.8-201ENST00000637757 681 ntBASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.5□□□□□ -2.33
LINC00299Q6ZSB3 Y_RNA.332-201ENST00000365271 113 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 RNU6-72P-201ENST00000384285 79 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 RNU6-278P-201ENST00000390945 109 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 SNORA17.3-201ENST00000391159 129 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 RAP1BP3-201ENST00000407180 549 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 SNORA11.2-201ENST00000408318 127 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 MTCO1P17-201ENST00000411522 491 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 RPS15AP12-201ENST00000419498 388 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 MTCYBP5-201ENST00000423752 1135 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 SNX2P2-201ENST00000424553 323 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 AC108667.1-201ENST00000428618 249 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 TIMM9P1-201ENST00000436122 256 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 SNRPEP7-201ENST00000438350 220 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 PAXBP1P1-201ENST00000449315 447 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 AL353718.1-201ENST00000451028 517 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 RNU6-953P-201ENST00000459154 107 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 RNA5SP503-201ENST00000517047 117 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 AC091163.3-201ENST00000518269 1144 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 DEFB130C-202ENST00000530001 230 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 DEFB108A-201ENST00000530110 222 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 MIR4698-201ENST00000577795 80 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 MIR4661-201ENST00000582720 75 ntBASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.49□□□□□ -2.33
LINC00299Q6ZSB3 AP002802.2-201ENST00000605877 235 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms