Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RC3H1Q5TC82 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RC3H1Q5TC82 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.13□□□□□ -1.59
RC3H1Q5TC82 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RC3H1Q5TC82 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RC3H1Q5TC82 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RC3H1Q5TC82 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.12□□□□□ -1.59
RC3H1Q5TC82 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RC3H1Q5TC82 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.12□□□□□ -1.59
RC3H1Q5TC82 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.12□□□□□ -1.59
RC3H1Q5TC82 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RC3H1Q5TC82 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.12□□□□□ -1.59
RC3H1Q5TC82 PTMAP5-201ENST00000393073 333 ntBASIC5.12□□□□□ -1.59
RC3H1Q5TC82 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.12□□□□□ -1.59
RC3H1Q5TC82 RPL29P14-201ENST00000495837 428 ntBASIC5.12□□□□□ -1.59
RC3H1Q5TC82 FCF1P8-201ENST00000510322 597 ntBASIC5.12□□□□□ -1.59
RC3H1Q5TC82 RNU6-589P-201ENST00000516485 107 ntBASIC5.12□□□□□ -1.59
RC3H1Q5TC82 RNU6-1198P-201ENST00000516904 67 ntBASIC5.12□□□□□ -1.59
RC3H1Q5TC82 AC087499.8-201ENST00000578406 226 ntBASIC5.12□□□□□ -1.59
RC3H1Q5TC82 AL138963.2-201ENST00000605137 226 ntBASIC5.12□□□□□ -1.59
RC3H1Q5TC82 AC096577.2-201ENST00000611455 153 ntBASIC5.12□□□□□ -1.59
RC3H1Q5TC82 SCARNA4-202ENST00000625402 129 ntBASIC5.12□□□□□ -1.59
RC3H1Q5TC82 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.12□□□□□ -1.59
RC3H1Q5TC82 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RC3H1Q5TC82 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.12□□□□□ -1.59
RC3H1Q5TC82 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RC3H1Q5TC82 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RC3H1Q5TC82 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RC3H1Q5TC82 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RC3H1Q5TC82 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RC3H1Q5TC82 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RC3H1Q5TC82 SRP72P2-201ENST00000344851 1979 ntBASIC5.11□□□□□ -1.59
RC3H1Q5TC82 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RC3H1Q5TC82 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RC3H1Q5TC82 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
RC3H1Q5TC82 CUL1P1-201ENST00000509510 2425 ntBASIC5.11□□□□□ -1.59
RC3H1Q5TC82 Y_RNA.101-201ENST00000363154 102 ntBASIC5.11□□□□□ -1.59
RC3H1Q5TC82 RNU6-527P-201ENST00000363425 104 ntBASIC5.11□□□□□ -1.59
RC3H1Q5TC82 Y_RNA.245-201ENST00000364493 95 ntBASIC5.11□□□□□ -1.59
RC3H1Q5TC82 MIR483-201ENST00000385070 76 ntBASIC5.11□□□□□ -1.59
RC3H1Q5TC82 MIR514A1-201ENST00000385133 98 ntBASIC5.11□□□□□ -1.59
RC3H1Q5TC82 RNA5SP89-201ENST00000410300 108 ntBASIC5.11□□□□□ -1.59
RC3H1Q5TC82 Y_RNA.595-201ENST00000410403 105 ntBASIC5.11□□□□□ -1.59
RC3H1Q5TC82 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.11□□□□□ -1.59
RC3H1Q5TC82 RPS12P23-201ENST00000419579 400 ntBASIC5.11□□□□□ -1.59
RC3H1Q5TC82 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.11□□□□□ -1.59
RC3H1Q5TC82 AL078601.1-201ENST00000444542 271 ntBASIC5.11□□□□□ -1.59
RC3H1Q5TC82 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.11□□□□□ -1.59
RC3H1Q5TC82 RNU7-107P-201ENST00000459121 61 ntBASIC5.11□□□□□ -1.59
RC3H1Q5TC82 AC139453.3-201ENST00000493276 369 ntBASIC5.11□□□□□ -1.59
RC3H1Q5TC82 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.11□□□□□ -1.59
RC3H1Q5TC82 RNU6-572P-201ENST00000516724 80 ntBASIC5.11□□□□□ -1.59
RC3H1Q5TC82 RNU7-143P-201ENST00000516781 65 ntBASIC5.11□□□□□ -1.59
RC3H1Q5TC82 RN7SKP234-201ENST00000517173 224 ntBASIC5.11□□□□□ -1.59
RC3H1Q5TC82 RNA5SP179-201ENST00000517284 121 ntBASIC5.11□□□□□ -1.59
RC3H1Q5TC82 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.11□□□□□ -1.59
RC3H1Q5TC82 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.11□□□□□ -1.59
RC3H1Q5TC82 AC090877.1-201ENST00000561418 344 ntBASIC5.11□□□□□ -1.59
RC3H1Q5TC82 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.11□□□□□ -1.59
RC3H1Q5TC82 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.11□□□□□ -1.59
RC3H1Q5TC82 DEFB117-201ENST00000602356 141 ntBASIC5.11□□□□□ -1.59
RC3H1Q5TC82 AC069294.1-201ENST00000608397 350 ntBASIC5.11□□□□□ -1.59
RC3H1Q5TC82 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RC3H1Q5TC82 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.11□□□□□ -1.59
RC3H1Q5TC82 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC5.11□□□□□ -1.59
RC3H1Q5TC82 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.11□□□□□ -1.59
RC3H1Q5TC82 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.11□□□□□ -1.59
RC3H1Q5TC82 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RC3H1Q5TC82 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RC3H1Q5TC82 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
RC3H1Q5TC82 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RC3H1Q5TC82 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RC3H1Q5TC82 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RC3H1Q5TC82 MAPK10-303ENST00000641324 3959 ntBASIC5.1□□□□□ -1.59
RC3H1Q5TC82 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RC3H1Q5TC82 RNU6-72P-201ENST00000384285 79 ntBASIC5.1□□□□□ -1.59
RC3H1Q5TC82 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RC3H1Q5TC82 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RC3H1Q5TC82 AC010095.1-201ENST00000443543 144 ntBASIC5.1□□□□□ -1.59
RC3H1Q5TC82 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.1□□□□□ -1.59
RC3H1Q5TC82 RPL31P13-201ENST00000484151 370 ntBASIC5.1□□□□□ -1.59
RC3H1Q5TC82 AC091874.1-201ENST00000511402 339 ntBASIC5.1□□□□□ -1.59
RC3H1Q5TC82 RNU6-168P-201ENST00000516189 101 ntBASIC5.1□□□□□ -1.59
RC3H1Q5TC82 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.1□□□□□ -1.59
RC3H1Q5TC82 ZNF192P1-203ENST00000565888 810 ntBASIC5.1□□□□□ -1.59
RC3H1Q5TC82 AC091167.4-201ENST00000605079 184 ntBASIC5.1□□□□□ -1.59
RC3H1Q5TC82 U73479.1-201ENST00000618062 168 ntBASIC5.1□□□□□ -1.59
RC3H1Q5TC82 AC140113.4-201ENST00000622087 222 ntBASIC5.1□□□□□ -1.59
RC3H1Q5TC82 AC027309.3-201ENST00000623419 351 ntBASIC5.1□□□□□ -1.59
RC3H1Q5TC82 AP001340.1-201ENST00000624405 217 ntBASIC5.1□□□□□ -1.59
RC3H1Q5TC82 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
RC3H1Q5TC82 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RC3H1Q5TC82 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RC3H1Q5TC82 AK9-203ENST00000368948 2478 ntTSL 5 BASIC5.09□□□□□ -1.59
RC3H1Q5TC82 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.09□□□□□ -1.59
RC3H1Q5TC82 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RC3H1Q5TC82 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RC3H1Q5TC82 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
RC3H1Q5TC82 RNU6-142P-201ENST00000384019 107 ntBASIC5.09□□□□□ -1.59
RC3H1Q5TC82 U1.1-201ENST00000384101 164 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms