Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
CCDC93Q567U6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CCDC93Q567U6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCDC93Q567U6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC93Q567U6 SNORD14B-201ENST00000364533 90 ntBASIC3.58□□□□□ -1.84
CCDC93Q567U6 RNU6-593P-201ENST00000364716 112 ntBASIC3.58□□□□□ -1.84
CCDC93Q567U6 RNU6-1227P-201ENST00000383981 107 ntBASIC3.58□□□□□ -1.84
CCDC93Q567U6 RNU6-217P-201ENST00000384164 104 ntBASIC3.58□□□□□ -1.84
CCDC93Q567U6 RNU6-601P-201ENST00000384540 107 ntBASIC3.58□□□□□ -1.84
CCDC93Q567U6 SNORA40C-201ENST00000391285 128 ntBASIC3.58□□□□□ -1.84
CCDC93Q567U6 MTCYBP4-201ENST00000401524 249 ntBASIC3.58□□□□□ -1.84
CCDC93Q567U6 UBE2V1P4-201ENST00000425374 344 ntBASIC3.58□□□□□ -1.84
CCDC93Q567U6 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC93Q567U6 AC096745.1-201ENST00000509945 370 ntBASIC3.58□□□□□ -1.84
CCDC93Q567U6 AC092436.3-201ENST00000511788 257 ntBASIC3.58□□□□□ -1.84
CCDC93Q567U6 RNU6-928P-201ENST00000516876 104 ntBASIC3.58□□□□□ -1.84
CCDC93Q567U6 SNORA31.19-201ENST00000517079 126 ntBASIC3.58□□□□□ -1.84
CCDC93Q567U6 OR1M4P-201ENST00000589199 287 ntBASIC3.58□□□□□ -1.84
CCDC93Q567U6 AL133215.3-201ENST00000609801 448 ntBASIC3.58□□□□□ -1.84
CCDC93Q567U6 AC007318.2-201ENST00000620999 243 ntBASIC3.58□□□□□ -1.84
CCDC93Q567U6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC93Q567U6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC93Q567U6 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
CCDC93Q567U6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC93Q567U6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CCDC93Q567U6 RNU6-43P-201ENST00000384302 107 ntBASIC3.57□□□□□ -1.84
CCDC93Q567U6 SNORA46-201ENST00000384762 135 ntBASIC3.57□□□□□ -1.84
CCDC93Q567U6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CCDC93Q567U6 Y_RNA.579-201ENST00000390939 94 ntBASIC3.57□□□□□ -1.84
CCDC93Q567U6 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC93Q567U6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC93Q567U6 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC93Q567U6 AC005534.2-201ENST00000431047 433 ntBASIC3.57□□□□□ -1.84
CCDC93Q567U6 AL627311.1-201ENST00000431514 115 ntBASIC3.57□□□□□ -1.84
CCDC93Q567U6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC93Q567U6 BRK1P2-201ENST00000442875 223 ntBASIC3.57□□□□□ -1.84
CCDC93Q567U6 AL513124.1-201ENST00000450410 614 ntBASIC3.57□□□□□ -1.84
CCDC93Q567U6 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC93Q567U6 AC116337.1-201ENST00000509680 687 ntBASIC3.57□□□□□ -1.84
CCDC93Q567U6 RNU6-572P-201ENST00000516724 80 ntBASIC3.57□□□□□ -1.84
CCDC93Q567U6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC93Q567U6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC93Q567U6 AL442663.2-201ENST00000554385 511 ntBASIC3.57□□□□□ -1.84
CCDC93Q567U6 AC093249.1-201ENST00000567049 203 ntBASIC3.57□□□□□ -1.84
CCDC93Q567U6 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC93Q567U6 ELOCP5-201ENST00000604924 333 ntBASIC3.57□□□□□ -1.84
CCDC93Q567U6 AC004832.5-201ENST00000608677 401 ntBASIC3.57□□□□□ -1.84
CCDC93Q567U6 AL591516.1-201ENST00000611326 274 ntBASIC3.57□□□□□ -1.84
CCDC93Q567U6 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.57□□□□□ -1.84
CCDC93Q567U6 MIR6128-201ENST00000615528 109 ntBASIC3.57□□□□□ -1.84
CCDC93Q567U6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC93Q567U6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC93Q567U6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC93Q567U6 AC243829.7-201ENST00000633081 225 ntBASIC3.57□□□□□ -1.84
CCDC93Q567U6 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
CCDC93Q567U6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC93Q567U6 RNU6-1188P-201ENST00000363795 107 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 RNU6-1329P-201ENST00000365664 107 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 RNU6-166P-201ENST00000384371 107 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 MIR34A-201ENST00000385130 110 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 RNU6-1304P-201ENST00000411374 106 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 AC245054.2-201ENST00000415639 319 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 HMGN2P30-201ENST00000423237 256 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 AC098614.2-201ENST00000426040 255 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 AC007560.1-201ENST00000426912 237 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC93Q567U6 RPL23AP58-201ENST00000440453 469 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC93Q567U6 RPS12P18-201ENST00000442381 270 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 AL078601.1-201ENST00000444542 271 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 NIPA2P5-201ENST00000452282 464 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 RNU7-152P-201ENST00000458982 64 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 RN7SL20P-201ENST00000488827 297 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 RNU6-1170P-201ENST00000515974 106 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 RNU6-1016P-201ENST00000516689 94 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 RN7SKP282-201ENST00000516824 299 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC93Q567U6 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.56□□□□□ -1.84
CCDC93Q567U6 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC93Q567U6 AL121821.2-201ENST00000556081 394 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC93Q567U6 AL645944.1-201ENST00000603857 493 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 AC123912.5-201ENST00000605470 343 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 AC124303.1-201ENST00000605703 360 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 AC064836.2-201ENST00000609491 462 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 FTX_3.1-201ENST00000610451 147 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 AC098657.3-201ENST00000620434 263 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC93Q567U6 AC110079.1-202ENST00000635213 138 ntBASIC3.56□□□□□ -1.84
CCDC93Q567U6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC93Q567U6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CCDC93Q567U6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC93Q567U6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC93Q567U6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC93Q567U6 SNORA63-201ENST00000363450 132 ntBASIC3.55□□□□□ -1.84
CCDC93Q567U6 Y_RNA.138-201ENST00000363462 102 ntBASIC3.55□□□□□ -1.84
CCDC93Q567U6 RNU6-270P-201ENST00000364131 105 ntBASIC3.55□□□□□ -1.84
CCDC93Q567U6 MIR10A-201ENST00000385043 110 ntBASIC3.55□□□□□ -1.84
CCDC93Q567U6 SNORD73A-201ENST00000386062 65 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms