Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 SNORA31.23-201ENST00000517219 133 ntBASIC3.32□□□□□ -1.88
KHDC1Q4VXA5 SCARNA20.6-201ENST00000517251 106 ntBASIC3.32□□□□□ -1.88
KHDC1Q4VXA5 RNU6-711P-201ENST00000517255 106 ntBASIC3.32□□□□□ -1.88
KHDC1Q4VXA5 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.32□□□□□ -1.88
KHDC1Q4VXA5 CBX3P8-201ENST00000532412 525 ntBASIC3.32□□□□□ -1.88
KHDC1Q4VXA5 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.32□□□□□ -1.88
KHDC1Q4VXA5 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
KHDC1Q4VXA5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.32□□□□□ -1.88
KHDC1Q4VXA5 AC084757.4-201ENST00000616350 526 ntBASIC3.32□□□□□ -1.88
KHDC1Q4VXA5 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.32□□□□□ -1.88
KHDC1Q4VXA5 AC097372.5-201ENST00000623665 376 ntBASIC3.32□□□□□ -1.88
KHDC1Q4VXA5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KHDC1Q4VXA5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 RNU1-70P-201ENST00000362618 164 ntBASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 Y_RNA.162-201ENST00000363683 102 ntBASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 Y_RNA.216-201ENST00000364205 93 ntBASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 RNU6-750P-201ENST00000390946 107 ntBASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 AC096649.2-201ENST00000416186 393 ntBASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 PTGES3P4-201ENST00000426243 356 ntBASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 RNU5F-8P-201ENST00000515941 111 ntBASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 RNU6-699P-201ENST00000517081 110 ntBASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 RNU6-988P-201ENST00000519081 107 ntBASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 AC025281.1-201ENST00000567026 265 ntBASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 MIR4276-201ENST00000584832 70 ntBASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 AC006557.5-201ENST00000603126 811 ntBASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 AC091152.3-201ENST00000604227 325 ntBASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 AC019159.1-201ENST00000605094 187 ntBASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 AL356157.2-201ENST00000605122 111 ntBASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 AC099778.2-201ENST00000610904 211 ntBASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KHDC1Q4VXA5 MTND5P9-201ENST00000503854 1755 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 Y_RNA.48-201ENST00000362710 103 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 SNORD50.1-201ENST00000362987 71 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 RNA5SP267-201ENST00000364893 126 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 SNORA33.2-201ENST00000365413 134 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 RNU6-487P-201ENST00000365430 104 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 SNORA22B-201ENST00000383876 138 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 RNU6-692P-201ENST00000384496 107 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 RNU6-19P-201ENST00000384718 107 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 snosnR66.1-201ENST00000391095 99 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 NUP35P1-201ENST00000422734 947 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 AC005326.1-201ENST00000429197 123 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 AC012308.1-201ENST00000451232 178 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 RNU6-120P-201ENST00000516077 103 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 SNORD59.2-201ENST00000516873 68 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 AP000889.1-201ENST00000530968 660 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 AC023442.1-201ENST00000531247 422 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 AL162713.1-201ENST00000604480 262 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 AC005014.2-201ENST00000607795 599 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 AC009318.2-201ENST00000610917 651 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 PART1_1.1-201ENST00000611761 217 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 AC091925.1-201ENST00000623204 462 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 AC008264.2-201ENST00000610193 3731 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 AC010889.1-201ENST00000566193 2666 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 ZNF299P-201ENST00000406845 1804 ntBASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KHDC1Q4VXA5 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 RNY1P16-201ENST00000363063 111 ntBASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 Y_RNA.428-201ENST00000384078 102 ntBASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 Y_RNA.533-201ENST00000384596 114 ntBASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 MIR591-201ENST00000385290 95 ntBASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 RNU6-308P-201ENST00000390957 107 ntBASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 RNA5SP390-201ENST00000410191 113 ntBASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 RNU2-49P-201ENST00000410666 184 ntBASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 RPL23AP67-201ENST00000465341 474 ntBASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 RNU5B-3P-201ENST00000516601 115 ntBASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 RN7SKP295-201ENST00000517264 153 ntBASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 CKS1BP7-201ENST00000522230 235 ntBASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 AL158827.2-201ENST00000602494 330 ntBASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 AC005034.5-201ENST00000604219 466 ntBASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 HMGB1P24-202ENST00000615653 685 ntBASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 AL691447.3-201ENST00000635020 330 ntBASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
KHDC1Q4VXA5 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.28□□□□□ -1.88
KHDC1Q4VXA5 AC091152.2-201ENST00000591628 2569 ntBASIC3.28□□□□□ -1.88
KHDC1Q4VXA5 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.28□□□□□ -1.88
KHDC1Q4VXA5 Y_RNA.123-201ENST00000363338 102 ntBASIC3.28□□□□□ -1.88
KHDC1Q4VXA5 RNU6-595P-201ENST00000363944 107 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms