Protein–RNA interactions for Protein: Q16143

SNCB, Beta-synuclein, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCBQ16143 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
SNCBQ16143 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
SNCBQ16143 LINC02555-201ENST00000563933 1951 ntBASIC0.72□□□□□ -2.29
SNCBQ16143 SNORA4.1-201ENST00000364263 144 ntBASIC0.71□□□□□ -2.3
SNCBQ16143 Y_RNA.332-201ENST00000365271 113 ntBASIC0.71□□□□□ -2.3
SNCBQ16143 RNA5SP390-201ENST00000410191 113 ntBASIC0.71□□□□□ -2.3
SNCBQ16143 RPL21P111-201ENST00000418453 477 ntBASIC0.71□□□□□ -2.3
SNCBQ16143 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.71□□□□□ -2.3
SNCBQ16143 SNX2P2-201ENST00000424553 323 ntBASIC0.71□□□□□ -2.3
SNCBQ16143 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SNCBQ16143 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.71□□□□□ -2.3
SNCBQ16143 MTCYBP42-201ENST00000444653 1130 ntBASIC0.71□□□□□ -2.3
SNCBQ16143 RNU6-751P-201ENST00000516382 101 ntBASIC0.71□□□□□ -2.3
SNCBQ16143 RN7SKP88-201ENST00000516847 250 ntBASIC0.71□□□□□ -2.3
SNCBQ16143 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.71□□□□□ -2.3
SNCBQ16143 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.71□□□□□ -2.3
SNCBQ16143 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.71□□□□□ -2.3
SNCBQ16143 MIR5094-201ENST00000578766 85 ntBASIC0.71□□□□□ -2.3
SNCBQ16143 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.71□□□□□ -2.3
SNCBQ16143 AC078795.2-201ENST00000602835 1252 ntBASIC0.71□□□□□ -2.3
SNCBQ16143 AC108706.1-201ENST00000611053 297 ntBASIC0.71□□□□□ -2.3
SNCBQ16143 7SK.8-201ENST00000612110 250 ntBASIC0.71□□□□□ -2.3
SNCBQ16143 7SK.11-201ENST00000615477 250 ntBASIC0.71□□□□□ -2.3
SNCBQ16143 AL159153.1-201ENST00000619688 317 ntBASIC0.71□□□□□ -2.3
SNCBQ16143 7SK.13-201ENST00000622040 250 ntBASIC0.71□□□□□ -2.3
SNCBQ16143 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
SNCBQ16143 SNORA18.2-201ENST00000383865 132 ntBASIC0.7□□□□□ -2.3
SNCBQ16143 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.7□□□□□ -2.3
SNCBQ16143 Y_RNA.597-201ENST00000410463 100 ntBASIC0.7□□□□□ -2.3
SNCBQ16143 EBAG9P1-201ENST00000418955 543 ntBASIC0.7□□□□□ -2.3
SNCBQ16143 TIMM9P2-201ENST00000419324 266 ntBASIC0.7□□□□□ -2.3
SNCBQ16143 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.7□□□□□ -2.3
SNCBQ16143 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.7□□□□□ -2.3
SNCBQ16143 AL603825.1-201ENST00000438481 80 ntBASIC0.7□□□□□ -2.3
SNCBQ16143 AC244505.5-201ENST00000443639 207 ntBASIC0.7□□□□□ -2.3
SNCBQ16143 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
SNCBQ16143 AL353718.1-201ENST00000451028 517 ntBASIC0.7□□□□□ -2.3
SNCBQ16143 RNA5SP269-201ENST00000459032 137 ntBASIC0.7□□□□□ -2.3
SNCBQ16143 AC134050.1-201ENST00000495088 933 ntBASIC0.7□□□□□ -2.3
SNCBQ16143 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.7□□□□□ -2.3
SNCBQ16143 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.7□□□□□ -2.3
SNCBQ16143 RNY4P37-201ENST00000516225 96 ntBASIC0.7□□□□□ -2.3
SNCBQ16143 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.7□□□□□ -2.3
SNCBQ16143 AC104417.1-201ENST00000523974 751 ntBASIC0.7□□□□□ -2.3
SNCBQ16143 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.7□□□□□ -2.3
SNCBQ16143 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SNCBQ16143 AC004817.2-201ENST00000561794 651 ntBASIC0.7□□□□□ -2.3
SNCBQ16143 MTCYBP33-201ENST00000575007 1130 ntBASIC0.7□□□□□ -2.3
SNCBQ16143 MIR4698-201ENST00000577795 80 ntBASIC0.7□□□□□ -2.3
SNCBQ16143 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.7□□□□□ -2.3
SNCBQ16143 AL512643.1-201ENST00000635735 524 ntBASIC0.7□□□□□ -2.3
SNCBQ16143 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.69□□□□□ -2.3
SNCBQ16143 MIR520A-201ENST00000384862 85 ntBASIC0.69□□□□□ -2.3
SNCBQ16143 MIR194-1-201ENST00000384892 85 ntBASIC0.69□□□□□ -2.3
SNCBQ16143 RNU6-1025P-201ENST00000410629 104 ntBASIC0.69□□□□□ -2.3
SNCBQ16143 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.69□□□□□ -2.3
SNCBQ16143 AL953862.1-201ENST00000423016 168 ntBASIC0.69□□□□□ -2.3
SNCBQ16143 AC004941.2-201ENST00000427009 228 ntBASIC0.69□□□□□ -2.3
SNCBQ16143 SNRPEP7-201ENST00000438350 220 ntBASIC0.69□□□□□ -2.3
SNCBQ16143 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.69□□□□□ -2.3
SNCBQ16143 NEFMP1-201ENST00000443423 1006 ntBASIC0.69□□□□□ -2.3
SNCBQ16143 AC012308.1-201ENST00000451232 178 ntBASIC0.69□□□□□ -2.3
SNCBQ16143 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.69□□□□□ -2.3
SNCBQ16143 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.69□□□□□ -2.3
SNCBQ16143 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
SNCBQ16143 RNU6-322P-201ENST00000516010 103 ntBASIC0.69□□□□□ -2.3
SNCBQ16143 MTND1P36-201ENST00000522384 936 ntBASIC0.69□□□□□ -2.3
SNCBQ16143 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.69□□□□□ -2.3
SNCBQ16143 AL157871.3-201ENST00000557231 293 ntBASIC0.69□□□□□ -2.3
SNCBQ16143 AC025678.1-201ENST00000567861 338 ntBASIC0.69□□□□□ -2.3
SNCBQ16143 MTCO2P2-201ENST00000591258 225 ntBASIC0.69□□□□□ -2.3
SNCBQ16143 VN1R107P-201ENST00000601784 209 ntBASIC0.69□□□□□ -2.3
SNCBQ16143 AC007363.1-201ENST00000604736 620 ntBASIC0.69□□□□□ -2.3
SNCBQ16143 AC112204.3-201ENST00000623822 332 ntBASIC0.69□□□□□ -2.3
SNCBQ16143 AL133216.2-202ENST00000634512 349 ntBASIC0.69□□□□□ -2.3
SNCBQ16143 MIR608-201ENST00000384820 100 ntBASIC0.68□□□□□ -2.3
SNCBQ16143 AL357139.1-201ENST00000407792 426 ntBASIC0.68□□□□□ -2.3
SNCBQ16143 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.68□□□□□ -2.3
SNCBQ16143 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.68□□□□□ -2.3
SNCBQ16143 AC083875.1-201ENST00000419509 405 ntBASIC0.68□□□□□ -2.3
SNCBQ16143 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.68□□□□□ -2.3
SNCBQ16143 MTND1P30-201ENST00000441241 901 ntBASIC0.68□□□□□ -2.3
SNCBQ16143 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SNCBQ16143 RPS27AP8-201ENST00000452665 445 ntBASIC0.68□□□□□ -2.3
SNCBQ16143 RNU6-953P-201ENST00000459154 107 ntBASIC0.68□□□□□ -2.3
SNCBQ16143 AC009646.1-201ENST00000510455 318 ntBASIC0.68□□□□□ -2.3
SNCBQ16143 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.68□□□□□ -2.3
SNCBQ16143 DEFB130C-202ENST00000530001 230 ntBASIC0.68□□□□□ -2.3
SNCBQ16143 AC092325.1-201ENST00000566449 554 ntBASIC0.68□□□□□ -2.3
SNCBQ16143 MIR1273C-201ENST00000578669 77 ntBASIC0.68□□□□□ -2.3
SNCBQ16143 AP000654.2-201ENST00000605633 586 ntBASIC0.68□□□□□ -2.3
SNCBQ16143 AC078880.5-201ENST00000617845 421 ntBASIC0.68□□□□□ -2.3
SNCBQ16143 MTND5P42-201ENST00000637720 498 ntBASIC0.68□□□□□ -2.3
SNCBQ16143 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
SNCBQ16143 RNU6-853P-201ENST00000364306 107 ntBASIC0.67□□□□□ -2.3
SNCBQ16143 RNU6-701P-201ENST00000384059 107 ntBASIC0.67□□□□□ -2.3
SNCBQ16143 MIR548B-201ENST00000385247 97 ntBASIC0.67□□□□□ -2.3
SNCBQ16143 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
SNCBQ16143 MTND4P25-201ENST00000441039 533 ntBASIC0.67□□□□□ -2.3
SNCBQ16143 AC097473.1-201ENST00000508142 408 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 196.7 ms