Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.18□□□□□ -2.06
PTCH1Q13635 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.18□□□□□ -2.06
PTCH1Q13635 RNU6-623P-201ENST00000363143 105 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 RNU6-501P-201ENST00000364072 100 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 SNORD116-4-201ENST00000384733 96 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 MIR517C-201ENST00000385103 95 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 SNORA67.6-201ENST00000391093 99 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 FCF1P10-201ENST00000407590 479 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 RNU2-36P-201ENST00000410361 191 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.17□□□□□ -2.06
PTCH1Q13635 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.17□□□□□ -2.06
PTCH1Q13635 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.17□□□□□ -2.06
PTCH1Q13635 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 AL353706.1-201ENST00000436728 494 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 AL078601.1-201ENST00000444542 271 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.17□□□□□ -2.06
PTCH1Q13635 AC091965.2-201ENST00000512324 613 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 Y_RNA.655-201ENST00000515919 96 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 Y_RNA.695-201ENST00000516715 107 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 SNORA31.19-201ENST00000517079 126 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.17□□□□□ -2.06
PTCH1Q13635 AC060788.1-201ENST00000521318 469 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.17□□□□□ -2.06
PTCH1Q13635 AC011979.2-201ENST00000527568 352 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.17□□□□□ -2.06
PTCH1Q13635 AC011604.1-201ENST00000545978 196 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.17□□□□□ -2.06
PTCH1Q13635 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.17□□□□□ -2.06
PTCH1Q13635 MIR3126-201ENST00000577443 74 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 AP000860.1-201ENST00000605250 559 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 AC006338.1-201ENST00000618453 749 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
PTCH1Q13635 AC121333.1-201ENST00000567488 2709 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PTCH1Q13635 MTND4P4-201ENST00000439033 1366 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 RNU5E-6P-201ENST00000365574 115 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 SMIM11P1-201ENST00000369586 178 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 Y_RNA.553-201ENST00000384670 102 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 AL353621.1-201ENST00000418219 243 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.17□□□□□ -2.06
PTCH1Q13635 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.17□□□□□ -2.06
PTCH1Q13635 RNA5SP269-201ENST00000459032 137 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.17□□□□□ -2.06
PTCH1Q13635 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.17□□□□□ -2.06
PTCH1Q13635 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.17□□□□□ -2.06
PTCH1Q13635 AC010424.1-201ENST00000506336 297 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 MTCO3P7-201ENST00000510008 774 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 MTND3P5-201ENST00000512798 333 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 RNU7-193P-201ENST00000516723 65 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 RNU6-1315P-201ENST00000517187 99 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 AC091489.2-201ENST00000566263 604 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 AC024614.2-201ENST00000577584 372 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.17□□□□□ -2.06
PTCH1Q13635 AC126118.1-201ENST00000607744 628 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 RNU6-91P-201ENST00000607774 107 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 HULC.1-201ENST00000612720 240 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 AC009878.1-201ENST00000621819 340 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 AP003400.5-201ENST00000624827 617 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 AC090582.1-201ENST00000636321 199 ntBASIC2.17□□□□□ -2.06
PTCH1Q13635 ZNF209P-201ENST00000593450 2304 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 RNU4-91P-201ENST00000364778 135 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 SNORA4.3-201ENST00000365564 137 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
PTCH1Q13635 RNU1-148P-201ENST00000384472 162 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 RNU6-1025P-201ENST00000410629 104 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.16□□□□□ -2.06
PTCH1Q13635 RPS27AP14-201ENST00000422868 454 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 DLGAP5P1-201ENST00000430307 464 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.16□□□□□ -2.06
PTCH1Q13635 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.16□□□□□ -2.06
PTCH1Q13635 MTCO1P19-201ENST00000443487 500 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 AC003071.1-201ENST00000451219 789 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 AC090515.1-201ENST00000465295 476 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 AC011005.2-201ENST00000487324 359 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 RNU5B-3P-201ENST00000516601 115 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 AP002963.1-201ENST00000530590 184 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 CYCSP26-201ENST00000534107 320 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 AC079598.5-201ENST00000547460 117 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.16□□□□□ -2.06
PTCH1Q13635 AC121758.2-201ENST00000553271 193 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.16□□□□□ -2.06
PTCH1Q13635 AC006362.1-201ENST00000567392 174 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 MIR1273C-201ENST00000578669 77 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 RSL24D1P11-201ENST00000591045 491 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 AC012065.4-201ENST00000602445 679 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 AC087752.4-201ENST00000605911 462 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 AC122108.2-201ENST00000611946 526 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 AC009509.4-201ENST00000619202 509 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 AC138627.2-201ENST00000624202 601 ntBASIC2.16□□□□□ -2.06
PTCH1Q13635 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.16□□□□□ -2.06
PTCH1Q13635 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.16□□□□□ -2.06
PTCH1Q13635 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.15□□□□□ -2.06
PTCH1Q13635 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
PTCH1Q13635 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
PTCH1Q13635 RNU6-960P-201ENST00000364056 120 ntBASIC2.15□□□□□ -2.07
PTCH1Q13635 RNY4P16-201ENST00000364768 94 ntBASIC2.15□□□□□ -2.07
PTCH1Q13635 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
PTCH1Q13635 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
PTCH1Q13635 AL355497.1-201ENST00000406262 551 ntBASIC2.15□□□□□ -2.07
PTCH1Q13635 RN7SKP142-201ENST00000411236 328 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms