Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNU6-85P-201ENST00000605989 107 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 AC093732.2-201ENST00000607950 274 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 HULC.1-201ENST00000612720 240 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 AC063943.3-201ENST00000615562 356 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 MIR6863-201ENST00000636112 90 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 AC241585.2-209ENST00000638217 143 ntBASIC2.24□□□□□ -2.05
SCN1BQ07699 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.24□□□□□ -2.05
SCN1BQ07699 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SCN1BQ07699 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.23□□□□□ -2.05
SCN1BQ07699 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
SCN1BQ07699 HMGN2P39-201ENST00000398005 273 ntBASIC2.23□□□□□ -2.05
SCN1BQ07699 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.23□□□□□ -2.05
SCN1BQ07699 RNU2-48P-201ENST00000410694 191 ntBASIC2.23□□□□□ -2.05
SCN1BQ07699 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.23□□□□□ -2.05
SCN1BQ07699 USP9YP20-201ENST00000419224 558 ntBASIC2.23□□□□□ -2.05
SCN1BQ07699 USP9YP18-201ENST00000425912 695 ntBASIC2.23□□□□□ -2.05
SCN1BQ07699 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.23□□□□□ -2.05
SCN1BQ07699 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.23□□□□□ -2.05
SCN1BQ07699 RPL7P54-201ENST00000438336 674 ntBASIC2.23□□□□□ -2.05
SCN1BQ07699 AC011816.1-201ENST00000441346 546 ntBASIC2.23□□□□□ -2.05
SCN1BQ07699 AL513328.1-201ENST00000446460 224 ntBASIC2.23□□□□□ -2.05
SCN1BQ07699 AL137159.1-201ENST00000452808 512 ntBASIC2.23□□□□□ -2.05
SCN1BQ07699 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.23□□□□□ -2.05
SCN1BQ07699 HMGB1P35-201ENST00000503360 598 ntBASIC2.23□□□□□ -2.05
SCN1BQ07699 RNU5F-2P-201ENST00000516066 82 ntBASIC2.23□□□□□ -2.05
SCN1BQ07699 RNU2-19P-201ENST00000517288 84 ntBASIC2.23□□□□□ -2.05
SCN1BQ07699 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.23□□□□□ -2.05
SCN1BQ07699 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.23□□□□□ -2.05
SCN1BQ07699 AC115990.1-201ENST00000526957 301 ntBASIC2.23□□□□□ -2.05
SCN1BQ07699 AP003034.1-201ENST00000534621 422 ntBASIC2.23□□□□□ -2.05
SCN1BQ07699 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SCN1BQ07699 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.23□□□□□ -2.05
SCN1BQ07699 AC090115.3-201ENST00000553218 849 ntBASIC2.23□□□□□ -2.05
SCN1BQ07699 MIR4529-201ENST00000578110 78 ntBASIC2.23□□□□□ -2.05
SCN1BQ07699 MIR5694-201ENST00000581190 76 ntBASIC2.23□□□□□ -2.05
SCN1BQ07699 MIR3941-201ENST00000582572 103 ntBASIC2.23□□□□□ -2.05
SCN1BQ07699 Z99129.1-201ENST00000612510 255 ntBASIC2.23□□□□□ -2.05
SCN1BQ07699 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.22□□□□□ -2.05
SCN1BQ07699 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SCN1BQ07699 MIRLET7G-201ENST00000362280 84 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 SNORD115-3-201ENST00000363100 82 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 RNU6-1285P-201ENST00000363480 105 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 RNU6-259P-201ENST00000383999 107 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 SNORA9-201ENST00000384215 133 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 RNU6-43P-201ENST00000384302 107 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 MIR491-201ENST00000384877 84 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 AL355497.1-201ENST00000406262 551 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 Y_RNA.597-201ENST00000410463 100 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 RNA5SP21-201ENST00000410917 96 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 AL590556.1-201ENST00000423231 483 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.22□□□□□ -2.05
SCN1BQ07699 AC010975.2-201ENST00000427781 588 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.22□□□□□ -2.05
SCN1BQ07699 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.22□□□□□ -2.05
SCN1BQ07699 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.22□□□□□ -2.05
SCN1BQ07699 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.22□□□□□ -2.05
SCN1BQ07699 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.22□□□□□ -2.05
SCN1BQ07699 AC011825.1-201ENST00000484967 388 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 RNA5SP82-201ENST00000516707 92 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 COPS8P3-201ENST00000526024 482 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 AC022616.8-201ENST00000533569 253 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.22□□□□□ -2.05
SCN1BQ07699 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.22□□□□□ -2.05
SCN1BQ07699 MIR4424-201ENST00000585257 86 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 SNRPGP17-201ENST00000603780 214 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 AP001330.5-201ENST00000607176 411 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 AC017083.3-201ENST00000609955 700 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 AL158209.2-201ENST00000619266 216 ntBASIC2.22□□□□□ -2.05
SCN1BQ07699 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SCN1BQ07699 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SCN1BQ07699 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SCN1BQ07699 RNU6-743P-201ENST00000364151 106 ntBASIC2.21□□□□□ -2.06
SCN1BQ07699 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SCN1BQ07699 RPS29P13-201ENST00000402041 169 ntBASIC2.21□□□□□ -2.06
SCN1BQ07699 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.21□□□□□ -2.06
SCN1BQ07699 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.21□□□□□ -2.06
SCN1BQ07699 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.21□□□□□ -2.06
SCN1BQ07699 RNA5SP401-201ENST00000515920 127 ntBASIC2.21□□□□□ -2.06
SCN1BQ07699 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.21□□□□□ -2.06
SCN1BQ07699 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.21□□□□□ -2.06
SCN1BQ07699 AC079600.2-201ENST00000550076 130 ntBASIC2.21□□□□□ -2.06
SCN1BQ07699 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.21□□□□□ -2.06
SCN1BQ07699 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.21□□□□□ -2.06
SCN1BQ07699 VN1R80P-201ENST00000597126 338 ntBASIC2.21□□□□□ -2.06
SCN1BQ07699 AL034555.1-201ENST00000604816 211 ntBASIC2.21□□□□□ -2.06
SCN1BQ07699 AC009090.3-201ENST00000616553 565 ntBASIC2.21□□□□□ -2.06
SCN1BQ07699 AL132822.1-201ENST00000617063 513 ntBASIC2.21□□□□□ -2.06
SCN1BQ07699 AC068792.1-201ENST00000621354 417 ntBASIC2.21□□□□□ -2.06
SCN1BQ07699 YWHAEP7-203ENST00000622054 312 ntBASIC2.21□□□□□ -2.06
SCN1BQ07699 OR5AK4P-201ENST00000635912 903 ntBASIC2.21□□□□□ -2.06
SCN1BQ07699 MIR203B-201ENST00000636080 86 ntBASIC2.21□□□□□ -2.06
SCN1BQ07699 SNORD98-201ENST00000636377 67 ntBASIC2.21□□□□□ -2.06
SCN1BQ07699 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SCN1BQ07699 SNORA6-201ENST00000384033 151 ntBASIC2.2□□□□□ -2.06
SCN1BQ07699 AL356057.3-201ENST00000402607 340 ntBASIC2.2□□□□□ -2.06
SCN1BQ07699 AC006946.1-201ENST00000429106 328 ntBASIC2.2□□□□□ -2.06
SCN1BQ07699 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.2□□□□□ -2.06
SCN1BQ07699 RPL32P28-201ENST00000443577 397 ntBASIC2.2□□□□□ -2.06
SCN1BQ07699 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms