Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 HSPE1P13-201ENST00000451143 297 ntBASIC0.83□□□□□ -2.28
HIST1H3AP68431 OR2AQ1P-201ENST00000451972 200 ntBASIC0.83□□□□□ -2.28
HIST1H3AP68431 AC093899.1-201ENST00000457984 376 ntBASIC0.83□□□□□ -2.28
HIST1H3AP68431 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.83□□□□□ -2.28
HIST1H3AP68431 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.83□□□□□ -2.28
HIST1H3AP68431 RNU6-677P-201ENST00000516914 101 ntBASIC0.83□□□□□ -2.28
HIST1H3AP68431 RNA5SP490-201ENST00000517141 136 ntBASIC0.83□□□□□ -2.28
HIST1H3AP68431 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.83□□□□□ -2.28
HIST1H3AP68431 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.83□□□□□ -2.28
HIST1H3AP68431 AP000907.2-201ENST00000530827 353 ntBASIC0.83□□□□□ -2.28
HIST1H3AP68431 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.83□□□□□ -2.28
HIST1H3AP68431 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.83□□□□□ -2.28
HIST1H3AP68431 AC090578.1-201ENST00000604955 591 ntBASIC0.83□□□□□ -2.28
HIST1H3AP68431 AL355472.4-201ENST00000610233 626 ntBASIC0.83□□□□□ -2.28
HIST1H3AP68431 AC007792.1-201ENST00000623023 402 ntBASIC0.83□□□□□ -2.28
HIST1H3AP68431 AP003485.1-201ENST00000625093 753 ntBASIC0.83□□□□□ -2.28
HIST1H3AP68431 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
HIST1H3AP68431 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
HIST1H3AP68431 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
HIST1H3AP68431 AL589826.1-201ENST00000340697 249 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 SNORD3E-201ENST00000362899 217 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 RNU6-1187P-201ENST00000364771 110 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
HIST1H3AP68431 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.82□□□□□ -2.28
HIST1H3AP68431 SNORA75B-201ENST00000384053 137 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 RNU6-224P-201ENST00000384055 107 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 RNU6-72P-201ENST00000384285 79 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 RNU6-360P-201ENST00000390944 104 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 RNA5SP390-201ENST00000410191 113 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 RNU2-7P-201ENST00000410794 178 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 MTND4P3-201ENST00000417829 541 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.82□□□□□ -2.28
HIST1H3AP68431 CALM1P1-201ENST00000442082 433 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.82□□□□□ -2.28
HIST1H3AP68431 MTCO2P25-201ENST00000447065 681 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 Z73417.1-201ENST00000447373 778 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.82□□□□□ -2.28
HIST1H3AP68431 RPS27AP8-201ENST00000452665 445 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 AC114982.1-201ENST00000469402 321 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 AL163195.1-201ENST00000496941 348 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 UBL5P1-201ENST00000507979 193 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.82□□□□□ -2.28
HIST1H3AP68431 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.82□□□□□ -2.28
HIST1H3AP68431 RNU6-1028P-201ENST00000517164 93 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.82□□□□□ -2.28
HIST1H3AP68431 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.82□□□□□ -2.28
HIST1H3AP68431 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.82□□□□□ -2.28
HIST1H3AP68431 NIFKP6-201ENST00000598115 845 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 BNIP3P31-201ENST00000604515 566 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 AL365204.3-201ENST00000612448 685 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 AL158163.2-201ENST00000619110 700 ntBASIC0.82□□□□□ -2.28
HIST1H3AP68431 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.82□□□□□ -2.28
HIST1H3AP68431 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.82□□□□□ -2.28
HIST1H3AP68431 MIR548B-201ENST00000385247 97 ntBASIC0.81□□□□□ -2.28
HIST1H3AP68431 SNORA40.2-201ENST00000390847 128 ntBASIC0.81□□□□□ -2.28
HIST1H3AP68431 Y_RNA.623-201ENST00000411128 95 ntBASIC0.81□□□□□ -2.28
HIST1H3AP68431 AP000275.1-201ENST00000411943 390 ntBASIC0.81□□□□□ -2.28
HIST1H3AP68431 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.81□□□□□ -2.28
HIST1H3AP68431 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.81□□□□□ -2.28
HIST1H3AP68431 RPL39P28-201ENST00000465655 155 ntBASIC0.81□□□□□ -2.28
HIST1H3AP68431 COX6CP14-201ENST00000469580 174 ntBASIC0.81□□□□□ -2.28
HIST1H3AP68431 AC008837.2-201ENST00000513076 418 ntBASIC0.81□□□□□ -2.28
HIST1H3AP68431 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.81□□□□□ -2.28
HIST1H3AP68431 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.81□□□□□ -2.28
HIST1H3AP68431 AC136932.1-201ENST00000574771 208 ntBASIC0.81□□□□□ -2.28
HIST1H3AP68431 AL391001.1-201ENST00000602747 715 ntBASIC0.81□□□□□ -2.28
HIST1H3AP68431 AC009033.1-201ENST00000624279 431 ntBASIC0.81□□□□□ -2.28
HIST1H3AP68431 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.81□□□□□ -2.28
HIST1H3AP68431 MTND5P35-201ENST00000557537 1720 ntBASIC0.81□□□□□ -2.28
HIST1H3AP68431 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HIST1H3AP68431 Y_RNA.255-201ENST00000364581 97 ntBASIC0.8□□□□□ -2.28
HIST1H3AP68431 MIR520A-201ENST00000384862 85 ntBASIC0.8□□□□□ -2.28
HIST1H3AP68431 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
HIST1H3AP68431 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.8□□□□□ -2.28
HIST1H3AP68431 USP9YP33-201ENST00000412220 421 ntBASIC0.8□□□□□ -2.28
HIST1H3AP68431 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.8□□□□□ -2.28
HIST1H3AP68431 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.8□□□□□ -2.28
HIST1H3AP68431 C8orf59P1-201ENST00000429930 303 ntBASIC0.8□□□□□ -2.28
HIST1H3AP68431 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.8□□□□□ -2.28
HIST1H3AP68431 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.8□□□□□ -2.28
HIST1H3AP68431 RPS27P1-201ENST00000450552 247 ntBASIC0.8□□□□□ -2.28
HIST1H3AP68431 RNU1-131P-201ENST00000458943 161 ntBASIC0.8□□□□□ -2.28
HIST1H3AP68431 RNU6-333P-201ENST00000459117 107 ntBASIC0.8□□□□□ -2.28
HIST1H3AP68431 RPS23P4-201ENST00000487908 423 ntBASIC0.8□□□□□ -2.28
HIST1H3AP68431 MTND2P33-201ENST00000506452 1031 ntBASIC0.8□□□□□ -2.28
HIST1H3AP68431 ARL2BPP4-201ENST00000506854 471 ntBASIC0.8□□□□□ -2.28
HIST1H3AP68431 MIR449C-201ENST00000516047 92 ntBASIC0.8□□□□□ -2.28
HIST1H3AP68431 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.8□□□□□ -2.28
HIST1H3AP68431 AP003465.2-201ENST00000602571 373 ntBASIC0.8□□□□□ -2.28
HIST1H3AP68431 AC124016.2-201ENST00000610058 665 ntBASIC0.8□□□□□ -2.28
HIST1H3AP68431 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.8□□□□□ -2.28
HIST1H3AP68431 AC012676.2-201ENST00000619258 186 ntBASIC0.8□□□□□ -2.28
HIST1H3AP68431 AC091895.1-201ENST00000624494 256 ntBASIC0.8□□□□□ -2.28
HIST1H3AP68431 AC092104.1-201ENST00000497346 1441 ntBASIC0.8□□□□□ -2.28
HIST1H3AP68431 SMIM11P1-201ENST00000369586 178 ntBASIC0.79□□□□□ -2.28
HIST1H3AP68431 RNU6-1080P-201ENST00000383982 107 ntBASIC0.79□□□□□ -2.28
HIST1H3AP68431 RNU6-321P-201ENST00000410912 106 ntBASIC0.79□□□□□ -2.28
HIST1H3AP68431 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.79□□□□□ -2.28
HIST1H3AP68431 VPS26BP1-201ENST00000417155 755 ntBASIC0.79□□□□□ -2.28
HIST1H3AP68431 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms