Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC241585.2-209ENST00000638217 143 ntBASIC3.77□□□□□ -1.81
YBX1P67809 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.77□□□□□ -1.81
YBX1P67809 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
YBX1P67809 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
YBX1P67809 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.77□□□□□ -1.81
YBX1P67809 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.77□□□□□ -1.81
YBX1P67809 AC006504.1-201ENST00000562493 3666 ntBASIC3.77□□□□□ -1.81
YBX1P67809 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
YBX1P67809 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
YBX1P67809 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.77□□□□□ -1.81
YBX1P67809 IPO8P1-201ENST00000455509 3109 ntBASIC3.77□□□□□ -1.81
YBX1P67809 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
YBX1P67809 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.77□□□□□ -1.81
YBX1P67809 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
YBX1P67809 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
YBX1P67809 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
YBX1P67809 ZNF826P-207ENST00000622273 1910 ntBASIC3.76□□□□□ -1.81
YBX1P67809 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.76□□□□□ -1.81
YBX1P67809 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
YBX1P67809 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
YBX1P67809 Y_RNA.8-201ENST00000362353 102 ntBASIC3.76□□□□□ -1.81
YBX1P67809 SNORA63.1-201ENST00000362493 131 ntBASIC3.76□□□□□ -1.81
YBX1P67809 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.76□□□□□ -1.81
YBX1P67809 RNU6-741P-201ENST00000383889 107 ntBASIC3.76□□□□□ -1.81
YBX1P67809 MIR7-3-201ENST00000384898 110 ntBASIC3.76□□□□□ -1.81
YBX1P67809 MIR153-2-201ENST00000385225 87 ntBASIC3.76□□□□□ -1.81
YBX1P67809 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.76□□□□□ -1.81
YBX1P67809 MIR1251-201ENST00000408552 70 ntBASIC3.76□□□□□ -1.81
YBX1P67809 AL451074.5-201ENST00000415894 435 ntBASIC3.76□□□□□ -1.81
YBX1P67809 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
YBX1P67809 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.76□□□□□ -1.81
YBX1P67809 HMGB1P37-201ENST00000439613 609 ntBASIC3.76□□□□□ -1.81
YBX1P67809 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.76□□□□□ -1.81
YBX1P67809 AP000870.1-201ENST00000472927 406 ntBASIC3.76□□□□□ -1.81
YBX1P67809 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.76□□□□□ -1.81
YBX1P67809 RPL30P1-201ENST00000488676 339 ntBASIC3.76□□□□□ -1.81
YBX1P67809 HMGB1P22-201ENST00000505315 124 ntBASIC3.76□□□□□ -1.81
YBX1P67809 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.76□□□□□ -1.81
YBX1P67809 SCARNA14-201ENST00000516903 136 ntBASIC3.76□□□□□ -1.81
YBX1P67809 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.76□□□□□ -1.81
YBX1P67809 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.76□□□□□ -1.81
YBX1P67809 AC099506.2-201ENST00000623074 221 ntBASIC3.76□□□□□ -1.81
YBX1P67809 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
YBX1P67809 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
YBX1P67809 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
YBX1P67809 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
YBX1P67809 AC135776.4-201ENST00000624300 1904 ntBASIC3.76□□□□□ -1.81
YBX1P67809 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
YBX1P67809 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
YBX1P67809 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
YBX1P67809 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
YBX1P67809 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.75□□□□□ -1.81
YBX1P67809 RNA5SP361-201ENST00000362686 118 ntBASIC3.75□□□□□ -1.81
YBX1P67809 RNU6-704P-201ENST00000364162 103 ntBASIC3.75□□□□□ -1.81
YBX1P67809 RNY1P5-201ENST00000383890 115 ntBASIC3.75□□□□□ -1.81
YBX1P67809 RNU6-804P-201ENST00000384286 107 ntBASIC3.75□□□□□ -1.81
YBX1P67809 RNU6-541P-201ENST00000384709 110 ntBASIC3.75□□□□□ -1.81
YBX1P67809 RPL19P1-201ENST00000411635 428 ntBASIC3.75□□□□□ -1.81
YBX1P67809 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.75□□□□□ -1.81
YBX1P67809 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.75□□□□□ -1.81
YBX1P67809 AL590383.1-201ENST00000428602 75 ntBASIC3.75□□□□□ -1.81
YBX1P67809 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.75□□□□□ -1.81
YBX1P67809 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.75□□□□□ -1.81
YBX1P67809 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.75□□□□□ -1.81
YBX1P67809 RN7SL271P-201ENST00000487601 295 ntBASIC3.75□□□□□ -1.81
YBX1P67809 VWA8P1-201ENST00000510889 176 ntBASIC3.75□□□□□ -1.81
YBX1P67809 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
YBX1P67809 RNU7-200P-201ENST00000516105 62 ntBASIC3.75□□□□□ -1.81
YBX1P67809 AC090281.1-201ENST00000523019 276 ntBASIC3.75□□□□□ -1.81
YBX1P67809 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.75□□□□□ -1.81
YBX1P67809 H3F3AP1-201ENST00000559984 334 ntBASIC3.75□□□□□ -1.81
YBX1P67809 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.75□□□□□ -1.81
YBX1P67809 AC104465.1-201ENST00000611365 139 ntBASIC3.75□□□□□ -1.81
YBX1P67809 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.75□□□□□ -1.81
YBX1P67809 AL591424.2-201ENST00000617023 128 ntBASIC3.75□□□□□ -1.81
YBX1P67809 AC091953.5-201ENST00000622919 233 ntBASIC3.75□□□□□ -1.81
YBX1P67809 U6.106-201ENST00000636360 105 ntBASIC3.75□□□□□ -1.81
YBX1P67809 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
YBX1P67809 AL359693.1-201ENST00000614959 2407 ntBASIC3.75□□□□□ -1.81
YBX1P67809 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
YBX1P67809 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
YBX1P67809 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
YBX1P67809 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
YBX1P67809 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.74□□□□□ -1.81
YBX1P67809 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
YBX1P67809 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
YBX1P67809 RNU6-50P-201ENST00000362356 103 ntBASIC3.74□□□□□ -1.81
YBX1P67809 SNORD115-32-201ENST00000364079 82 ntBASIC3.74□□□□□ -1.81
YBX1P67809 Y_RNA.233-201ENST00000364407 101 ntBASIC3.74□□□□□ -1.81
YBX1P67809 Y_RNA.275-201ENST00000364726 110 ntBASIC3.74□□□□□ -1.81
YBX1P67809 RNU6-923P-201ENST00000364753 107 ntBASIC3.74□□□□□ -1.81
YBX1P67809 Y_RNA.304-201ENST00000365011 112 ntBASIC3.74□□□□□ -1.81
YBX1P67809 RNU6-1286P-201ENST00000383871 107 ntBASIC3.74□□□□□ -1.81
YBX1P67809 RNU6-1035P-201ENST00000384477 107 ntBASIC3.74□□□□□ -1.81
YBX1P67809 RNU6-1081P-201ENST00000384537 107 ntBASIC3.74□□□□□ -1.81
YBX1P67809 MIR30B-201ENST00000384850 88 ntBASIC3.74□□□□□ -1.81
YBX1P67809 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
YBX1P67809 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.74□□□□□ -1.81
YBX1P67809 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.74□□□□□ -1.81
YBX1P67809 MTCO1P5-201ENST00000433573 344 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms