Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.02□□□□□ -2.25
AP1S1P61966 Y_RNA.46-201ENST00000362695 102 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 SNORA4.1-201ENST00000364263 144 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 SNORA62.1-201ENST00000364287 154 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 SNORD116-20-201ENST00000384529 92 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
AP1S1P61966 Y_RNA.623-201ENST00000411128 95 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.02□□□□□ -2.25
AP1S1P61966 ELOCP17-201ENST00000414751 326 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 ELOCP9-201ENST00000418624 239 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 RPS3AP37-201ENST00000419176 745 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.02□□□□□ -2.25
AP1S1P61966 AL022238.1-201ENST00000442557 355 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 AC245102.2-201ENST00000448956 180 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 MTCYBP40-201ENST00000509390 1135 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 AC010376.1-201ENST00000522101 334 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 AP003034.1-201ENST00000534621 422 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 AC023050.2-201ENST00000544968 387 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.02□□□□□ -2.25
AP1S1P61966 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.02□□□□□ -2.25
AP1S1P61966 CYP2C61P-201ENST00000604072 290 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 RNU6-88P-201ENST00000606801 100 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.02□□□□□ -2.25
AP1S1P61966 AC024940.5-201ENST00000622889 474 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 AL138960.2-201ENST00000625145 535 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 AL133216.2-202ENST00000634512 349 ntBASIC1.02□□□□□ -2.25
AP1S1P61966 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.02□□□□□ -2.25
AP1S1P61966 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
AP1S1P61966 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.01□□□□□ -2.25
AP1S1P61966 RNU6-1210P-201ENST00000363775 107 ntBASIC1.01□□□□□ -2.25
AP1S1P61966 RNU6-271P-201ENST00000363858 105 ntBASIC1.01□□□□□ -2.25
AP1S1P61966 RNA5SP493-201ENST00000364115 91 ntBASIC1.01□□□□□ -2.25
AP1S1P61966 Y_RNA.597-201ENST00000410463 100 ntBASIC1.01□□□□□ -2.25
AP1S1P61966 RNU2-23P-201ENST00000410545 195 ntBASIC1.01□□□□□ -2.25
AP1S1P61966 AL669831.1-202ENST00000428504 417 ntBASIC1.01□□□□□ -2.25
AP1S1P61966 EEF1A1P39-201ENST00000440791 250 ntBASIC1.01□□□□□ -2.25
AP1S1P61966 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.01□□□□□ -2.25
AP1S1P61966 AC016550.1-201ENST00000505348 785 ntBASIC1.01□□□□□ -2.25
AP1S1P61966 AC112206.3-201ENST00000514578 389 ntBASIC1.01□□□□□ -2.25
AP1S1P61966 RNU6-677P-201ENST00000516914 101 ntBASIC1.01□□□□□ -2.25
AP1S1P61966 RNU6-1092P-201ENST00000516955 87 ntBASIC1.01□□□□□ -2.25
AP1S1P61966 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.01□□□□□ -2.25
AP1S1P61966 AC018630.3-201ENST00000542637 96 ntBASIC1.01□□□□□ -2.25
AP1S1P61966 MIR3169-201ENST00000578032 83 ntBASIC1.01□□□□□ -2.25
AP1S1P61966 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.01□□□□□ -2.25
AP1S1P61966 AL590240.4-201ENST00000616908 390 ntBASIC1.01□□□□□ -2.25
AP1S1P61966 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.01□□□□□ -2.25
AP1S1P61966 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.01□□□□□ -2.25
AP1S1P61966 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1□□□□□ -2.25
AP1S1P61966 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
AP1S1P61966 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1□□□□□ -2.25
AP1S1P61966 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
AP1S1P61966 RNU6-212P-201ENST00000362642 104 ntBASIC1□□□□□ -2.25
AP1S1P61966 RNU6-487P-201ENST00000365430 104 ntBASIC1□□□□□ -2.25
AP1S1P61966 RNU6-395P-201ENST00000365662 106 ntBASIC1□□□□□ -2.25
AP1S1P61966 RNU6-1080P-201ENST00000383982 107 ntBASIC1□□□□□ -2.25
AP1S1P61966 TRIM60P10Y-201ENST00000425589 751 ntBASIC1□□□□□ -2.25
AP1S1P61966 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1□□□□□ -2.25
AP1S1P61966 AL008629.1-201ENST00000438615 184 ntBASIC1□□□□□ -2.25
AP1S1P61966 KATNBL1P3-201ENST00000443475 909 ntBASIC1□□□□□ -2.25
AP1S1P61966 MTND2P4-201ENST00000445034 1004 ntBASIC1□□□□□ -2.25
AP1S1P61966 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1□□□□□ -2.25
AP1S1P61966 AC003071.1-201ENST00000451219 789 ntBASIC1□□□□□ -2.25
AP1S1P61966 AC012308.1-201ENST00000451232 178 ntBASIC1□□□□□ -2.25
AP1S1P61966 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1□□□□□ -2.25
AP1S1P61966 snoU13.9-201ENST00000458927 103 ntBASIC1□□□□□ -2.25
AP1S1P61966 snoU13.14-201ENST00000459372 104 ntBASIC1□□□□□ -2.25
AP1S1P61966 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1□□□□□ -2.25
AP1S1P61966 RNA5SP216-201ENST00000516111 123 ntBASIC1□□□□□ -2.25
AP1S1P61966 RN7SKP256-201ENST00000517201 314 ntBASIC1□□□□□ -2.25
AP1S1P61966 RNU6-902P-201ENST00000517212 91 ntBASIC1□□□□□ -2.25
AP1S1P61966 AC107934.1-201ENST00000522215 217 ntBASIC1□□□□□ -2.25
AP1S1P61966 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1□□□□□ -2.25
AP1S1P61966 BNIP3P6-201ENST00000549284 499 ntBASIC1□□□□□ -2.25
AP1S1P61966 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1□□□□□ -2.25
AP1S1P61966 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1□□□□□ -2.25
AP1S1P61966 SUB1P4-201ENST00000566062 339 ntBASIC1□□□□□ -2.25
AP1S1P61966 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1□□□□□ -2.25
AP1S1P61966 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1□□□□□ -2.25
AP1S1P61966 DEFB131E-202ENST00000602581 683 ntBASIC1□□□□□ -2.25
AP1S1P61966 MIR8074-201ENST00000615081 81 ntBASIC1□□□□□ -2.25
AP1S1P61966 AP002782.1-201ENST00000623107 614 ntBASIC1□□□□□ -2.25
AP1S1P61966 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1□□□□□ -2.25
AP1S1P61966 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1□□□□□ -2.25
AP1S1P61966 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.99□□□□□ -2.25
AP1S1P61966 MTND4P16-201ENST00000466108 1367 ntBASIC0.99□□□□□ -2.25
AP1S1P61966 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
AP1S1P61966 MTND5P9-201ENST00000503854 1755 ntBASIC0.99□□□□□ -2.25
AP1S1P61966 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
AP1S1P61966 RNY4P16-201ENST00000364768 94 ntBASIC0.99□□□□□ -2.25
AP1S1P61966 RNU6-384P-201ENST00000364900 104 ntBASIC0.99□□□□□ -2.25
AP1S1P61966 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
AP1S1P61966 MIR10A-201ENST00000385043 110 ntBASIC0.99□□□□□ -2.25
AP1S1P61966 RNU6-1242P-201ENST00000391052 103 ntBASIC0.99□□□□□ -2.25
AP1S1P61966 AL031779.1-201ENST00000415663 330 ntBASIC0.99□□□□□ -2.25
AP1S1P61966 RPL21P90-201ENST00000415692 466 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms